Some Intuition behind Large Cardinal Axioms, Their Characterization, and Related Results

We aim to explain the intuition behind several large cardinal axioms, give characterization theorems for these axioms, and then discuss a few of their properties. As a capstone, we hope to introduce a new large cardinal notion and give a similar characterization theorem of this new notion. Our new notion of near strong compactness was inspired by the similar notion of near supercompactness, due to Jason Schanker

The osmotic stress response of ale and lager yeast

Brewing ale (Saccharomyces cerevisiae) and lager (Saccharomyces cerevisiae (syn S. pastorianus) yeast populations are subject to biological, chemical and physical stress during the brewing process. Osmotic stress is evident at discreet points throughout this industrial process, yet the impact of this stress on yeast tolerance, defence and repair has not been investigated. Haploid strains of Saccharomyces cerevisiae exhibit different tolerances to hyper-osmotic stress in which the solute concentration of the surrounding medium exceeds the cell's cytoplasm. The osmotolerance of ale and lager yeast to sorbitol and NaCI-induced osmotic stress has not been previously investigated but was observed to be strain, growth phase and solute dependent, reflecting inherent genetic differences in the management of this stress in all cases. It has been postulated that the yeast vacuole plays a central role in the maintenance of physiological activity during osmotic stress. The gross morphological changes occurring in this organelle during osmotic stress were examined. The vacuole of brewing yeast strains was demonstrated to exhibit a highly fragmented morphology, independent of strain, growth phase and osmotic stress. The fragmentation of the yeast vacuole could not be correlated to one external parameter, and was therefore not observed to be a good biomarker of osmotic stress. Saccharomyces cerevisiae exhibits a series of responses to osmotic stress. Cells may demonstrate an innate ability to withstand osmotic stress. In most instances however, osmotolerance is achieved when cells accumulate compatible solutes in order to increase intracellular osmolarity thus promoting retention of cellular water and as a result maintenance of turgor and viability. Yeast cells preferentially accumulate the polyhydric alcohol glycerol, although a detailed study on glycerol accumulation in brewing yeast strains during osmotic stress has not been previously reported. Intracellular compatible solute accumulation was observed to be complex in brewing yeast strains. Analysis of the cytosolic pool of amino acids demonstrated that there were discreet compositional changes during osmotic stress, however no single amino acid was hyper-accumulated. Glycerol accumulation could not be correlated to the intensity of osmotic stress, however the response observed was strain, growth-phase and solute type dependent. PCR detection revealed that the elucidated genes involved in glycerol biosynthesis were present in all production brewing strains examined. Sequence analysis of the GPDJ gene (encoding a cytoplasmic glycerol-3-phosphate dehydrogenase) revealed point mutations in the sequence of the SCB2 (lager) strain sufficient to affect the primary structure of Gpdlp but not its' functionality. In the ale strain SCB8 no such differences occurred. The unusual glycerol profile observed with both strains appeared to be a function of GPDJ and Gpd 1p production. However it was noted that glycerol export may have also contributed to this phenomenon

Engineering soil organic matter quality: Biodiesel Co-Product (BCP) stimulates exudation of nitrogenous microbial biopolymers

Biodiesel Co-Product (BCP) is a complex organic material formed during the transesterification of lipids. We investigated the effect of BCP on the extracellular microbial matrix or ‘extracellular polymeric substance’ (EPS) in soil which is suspected to be a highly influential fraction of soil organic matter (SOM). It was hypothesised that more N would be transferred to EPS in soil given BCP compared to soil given glycerol. An arable soil was amended with BCP produced from either 1) waste vegetable oils or 2) pure oilseed rape oil, and compared with soil amended with 99% pure glycerol; all were provided with 15N labelled KNO3. We compared transfer of microbially assimilated 15N into the extracellular amino acid pool, and measured concomitant production of exopolysaccharide. Following incubation, the 15N enrichment of total hydrolysable amino acids (THAAs) indicated that intracellular anabolic products had incorporated the labelled N primarily as glutamine and glutamate. A greater proportion of the amino acids in EPS were found to contain 15N than those in the THAA pool, indicating that the increase in EPS was comprised of bioproducts synthesised de novo. Moreover, BCP had increased the EPS production efficiency of the soil microbial community (μg EPS per unit ATP) up to approximately double that of glycerol, and caused transfer of 21% more 15N from soil solution into EPS-amino acids. Given the suspected value of EPS in agricultural soils, the use of BCP to stimulate exudation is an interesting tool to consider in the theme of delivering sustainable intensification

Genetic associations with childhood brain growth, defined in two longitudinal cohorts

Genome-wide association studies (GWASs) are unraveling the genetics of adult brain neuroanatomy as measured by cross-sectional anatomic magnetic resonance imaging (aMRI). However, the genetic mechanisms that shape childhood brain development are, as yet, largely unexplored. In this study we identify common genetic variants associated with childhood brain development as defined by longitudinal aMRI. Genome-wide single nucleotide polymorphism (SNP) data were determined in two cohorts: one enriched for attention-deficit/hyperactivity disorder (ADHD) (LONG cohort: 458 participants; 119 with ADHD) and the other from a population-based cohort (Generation R: 257 participants). The growth of the brain's major regions (cerebral cortex, white matter, basal ganglia, and cerebellum) and one region of interest (the right lateral prefrontal cortex) were defined on all individuals from two aMRIs, and a GWAS and a pathway analysis were performed. In addition, association between polygenic risk for ADHD and brain growth was determined for the LONG cohort. For white matter growth, GWAS meta-analysis identified a genome-wide significant intergenic SNP (rs12386571, P = 9.09 × 10-9 ), near AKR1B10. This gene is part of the aldo-keto reductase superfamily and shows neural expression. No enrichment of neural pathways was detected and polygenic risk for ADHD was not associated with the brain growth phenotypes in the LONG cohort that was enriched for the diagnosis of ADHD. The study illustrates the use of a novel brain growth phenotype defined in vivo for further study

Serendipitous XMM-Newton discovery of a cluster of galaxies at z=0.28

We report the discovery of a galaxy cluster serendipitously detected as an extended X-ray source in an offset observation of the group NGC 5044. The cluster redshift, z=0.281, determined from the optical spectrum of the brightest cluster galaxy, agrees with that inferred from the X-ray spectrum using the Fe K alpha complex of the hot ICM (z=0.27 +/- 0.01). Based on the 50 ks XMM observation, we find that within a radius of 383 kpc the cluster has an unabsorbed X-ray flux, f_X (0.5-2 keV) = 3.34 (+0.08, -0.13) x 10^{-13} erg/cm^2/s, a bolometric X-ray luminosity, L_X = 2.21 (+0.34, -0.19) x 10^{44} erg/s, kT = 3.57 +/- 0.12 keV, and metallicity, 0.60 +/- 0.09 solar. The cluster obeys the scaling relations for L_X and T observed at intermediate redshift. The mass derived from an isothermal NFW model fit is, M_vir = 3.89 +/- 0.35 x 10^{14} solar masses, with a concentration parameter, c = 6.7 +/- 0.4, consistent with the range of values expected in the concordance cosmological model for relaxed clusters. The optical properties suggest this could be a ``fossil cluster''.Comment: 5 pages, 4 colour figures, accepted for publication in Ap

The mechanical and microstructural behaviour of calcite-dolomite composites: An experimental investigation

The styles and mechanisms of deformation associated with many variably dolomitized limestone shear systems are strongly controlled by strain partitioning between dolomite and calcite. Here, we present experimental results from the deformation of four composite materials designed to address the role of dolomite on the strength of limestone. Composites were synthesized by hot isostatic pressing mixtures of dolomite (Dm) and calcite powders (% Dm: 25%-Dm, 35%-Dm, 51%-Dm, and 75%-Dm). In all composites, calcite is finer grained than dolomite. The synthesized materials were deformed in torsion at constant strain rate (3 × 10−4 and 1 × 10−4 s−1), high effective pressure (262 MPa), and high temperature (750 °C) to variable finite shear strains. Mechanical data show an increase in yield strength with increasing dolomite content. Composites with 50%) dolomite content samples, the addition of 25% fine-grained calcite significantly weakens dolomite, such that strain can be partially localized along narrow ribbons of fine-grained calcite. Deformation of dolomite grains by shear fracture is observed; there is no intracrystalline deformation in dolomite irrespective of its relative abundance and finite shear strain

Limits to the biofortification of leafy brassicas with zinc

Many humans lack sufficient zinc (Zn) in their diet for their wellbeing and increasing Zn concentrations in edible produce (biofortification) can mitigate this. Recent efforts have focused on biofortifying staple crops. However, greater Zn concentrations can be achieved in leafy vegetables than in fruits, seeds, or tubers. Brassicas, such as cabbage and broccoli, are widely consumed and might provide an additional means to increase dietary Zn intake. Zinc concentrations in brassicas are limited primarily by Zn phytotoxicity. To assess the limits of Zn biofortification of brassicas, the Zn concentration in a peat:sand (v/v 75:25) medium was manipulated to examine the relationship between shoot Zn concentration and shoot dry weight (DW) and thereby determine the critical shoot Zn concentrations, defined as the shoot Zn concentration at which yield is reduced below 90%. The critical shoot Zn concentration was regarded as the commercial limit to Zn biofortification. Experiments were undertaken over six successive years. A linear relationship between Zn fertiliser application and shoot Zn concentration was observed at low application rates. Critical shoot Zn concentrations ranged from 0.074 to 1.201 mg Zn g−1 DW among cabbage genotypes studied in 2014, and between 0.117 and 1.666 mg Zn g−1 DW among broccoli genotypes studied in 2015–2017. It is concluded that if 5% of the dietary Zn intake of a population is currently delivered through brassicas, then the biofortification of brassicas from 0.057 to > 0.100 mg Zn g−1 DW through the application of Zn fertilisers could increase dietary Zn intake substantially