3 research outputs found
Development of Liquid Chromatographic Retention Index Based on Cocamide Diethanolamine Homologous Series (C(<i>n</i>)‑DEA)
There is a growing need for indexing and harmonizing
retention
time (tR) data in liquid chromatography derived under different conditions
to aid in the identification of compounds in high resolution mass
spectrometry (HRMS) based suspect and nontarget screening of environmental
samples. In this study, a rigorously tested, inexpensive, and simple
system-independent retention index (RI) approach is presented for
liquid chromatography (LC), based on the cocamide diethanolamine homologous
series (C(n = 0–23)-DEA). The validation of
the CDEA based RI system was checked rigorously on eight different
instrumentation and LC conditions. The RI values were modeled using
molecular descriptor free technique based on structural barcoding
and convolutional neural network deep learning. The effect of pH on
the elution pattern of more than 402 emerging contaminants were studied
under diverse LC settings. The uncertainty associated with the CDEA
RI model and the pH effect were addressed and the first RI bank based
on CDEA calibrants was developed. The proposed RI system was used
to enhance identification confidence in suspect and nontarget screening
while facilitating successful comparability of retention index data
between various LC settings. The CDEA RI app can be accessed at https://github.com/raalizadeh/RIdea
Development of Liquid Chromatographic Retention Index Based on Cocamide Diethanolamine Homologous Series (C(<i>n</i>)‑DEA)
There is a growing need for indexing and harmonizing
retention
time (tR) data in liquid chromatography derived under different conditions
to aid in the identification of compounds in high resolution mass
spectrometry (HRMS) based suspect and nontarget screening of environmental
samples. In this study, a rigorously tested, inexpensive, and simple
system-independent retention index (RI) approach is presented for
liquid chromatography (LC), based on the cocamide diethanolamine homologous
series (C(n = 0–23)-DEA). The validation of
the CDEA based RI system was checked rigorously on eight different
instrumentation and LC conditions. The RI values were modeled using
molecular descriptor free technique based on structural barcoding
and convolutional neural network deep learning. The effect of pH on
the elution pattern of more than 402 emerging contaminants were studied
under diverse LC settings. The uncertainty associated with the CDEA
RI model and the pH effect were addressed and the first RI bank based
on CDEA calibrants was developed. The proposed RI system was used
to enhance identification confidence in suspect and nontarget screening
while facilitating successful comparability of retention index data
between various LC settings. The CDEA RI app can be accessed at https://github.com/raalizadeh/RIdea
First Novel Workflow for Semiquantification of Emerging Contaminants in Environmental Samples Analyzed by Gas Chromatography–Atmospheric Pressure Chemical Ionization–Quadrupole Time of Flight–Mass Spectrometry
The ionization efficiency
of emerging contaminants was modeled
for the first time in gas chromatography-high-resolution mass spectrometry
(GC-HRMS) which is coupled to an atmospheric pressure chemical ionization
source (APCI). The recent chemical space has been expanded in environmental
samples such as soil, indoor dust, and sediments thanks to recent
use of high-resolution mass spectrometric techniques; however, many
of these chemicals have remained unquantified. Chemical exposure in
dust can pose potential risk to human health, and semiquantitative
analysis is potentially of need to semiquantify these newly identified
substances and assist with their risk assessment and environmental
fate. In this study, a rigorously tested semiquantification workflow
was proposed based on GC-APCI-HRMS ionization efficiency measurements
of 78 emerging contaminants. The mechanism of ionization of compounds
in the APCI source was discussed via a simple connectivity index and
topological structure. The quantitative structure–property
relationship (QSPR)-based model was also built to predict the APCI
ionization efficiencies of unknowns and later use it for their quantification
analyses. The proposed semiquantification method could be transferred
into the household indoor dust sample matrix, and it could include
the effect of recovery and matrix in the predictions of actual concentrations
of analytes. A suspect compound, which falls inside the application
domain of the tool, can be semiquantified by an online web application,
free of access at http://trams.chem.uoa.gr/semiquantification/
