10 research outputs found
Non-uniform space filling (NUSF) designs
Space-filling designs are a convenient and effective approach for exploring the input space for experiments. However, standard choices for these designs strive to provide uniform density of points throughout the region of interest. There are numerous situations where flexibility to adapt the density of points to match specific design objectives would be advantageous to maximize the efficiency of the design. In this paper, we propose non-uniform space-filling (NUSF) designs to achieve a user-specified desired density distribution of design points across the input space and demonstrate how to implement NUSF designs in different ways to provide the experimenters with flexibility to match their goals. The approach is flexible for a variety of scenarios where the experimenter wishes to control the density of points throughout the region while still preserving the space-filling characteristic. Details are provided about how to translate a problem into an appropriate weight structure to generate several designs which can then be compared using graphical methods, including the Closest Distance by Weight plot, to determine if the desired characteristics have been achieved. The methods are demonstrated with two real examples with different requirements for design point placement.</p
Next-Generation Epigenetic Detection Technique: Identifying Methylated Cytosine Using Graphene Nanopore
DNA methylation plays a pivotal role
in the genetic evolution of
both embryonic and adult cells. For adult somatic cells, the location
and dynamics of methylation have been very precisely pinned down with
the 5-cytosine markers on cytosine-phosphate-guanine (CpG) units.
Unusual methylation on CpG islands is identified as one of the prime
causes for silencing the tumor suppressant genes. Early detection
of methylation changes can diagnose the potentially harmful oncogenic
evolution of cells and provide promising guideline for cancer prevention.
With this motivation, we propose a cytosine methylation detection
technique. Our hypothesis is that electronic signatures of DNA acquired
as a molecule translocates through a nanopore would be significantly
different for methylated and nonmethylated bases. This difference
in electronic fingerprints would allow for reliable real-time differentiation
of methylated DNA. We calculate transport currents through a punctured
graphene membrane while the cytosine and methylated cytosine translocate
through the nanopore. We also calculate the transport properties for
uracil and cyanocytosine for comparison. Our calculations of transmission,
current, and tunneling conductance show distinct signatures in their
spectrum for each molecular type. Thus, in this work, we provide a
theoretical analysis that points to a viability of our hypothesis
Electronic Fingerprints of DNA Bases on Graphene
We calculate the electronic local density of states (LDOS)
of DNA
nucleotide bases (A,C,G,T), deposited on graphene. We observe significant
base-dependent features in the LDOS in an energy range within a few
electronvolts of the Fermi level. These features can serve as electronic
fingerprints for the identification of individual bases in scanning
tunneling spectroscopy (STS) experiments that perform image and site
dependent spectroscopy on biomolecules. Thus the fingerprints of DNA-graphene
hybrid structures may provide an alternative route to DNA sequencing
using STS
Electronic Fingerprints of DNA Bases on Graphene
We calculate the electronic local density of states (LDOS)
of DNA
nucleotide bases (A,C,G,T), deposited on graphene. We observe significant
base-dependent features in the LDOS in an energy range within a few
electronvolts of the Fermi level. These features can serve as electronic
fingerprints for the identification of individual bases in scanning
tunneling spectroscopy (STS) experiments that perform image and site
dependent spectroscopy on biomolecules. Thus the fingerprints of DNA-graphene
hybrid structures may provide an alternative route to DNA sequencing
using STS
Electronic Fingerprints of DNA Bases on Graphene
We calculate the electronic local density of states (LDOS)
of DNA
nucleotide bases (A,C,G,T), deposited on graphene. We observe significant
base-dependent features in the LDOS in an energy range within a few
electronvolts of the Fermi level. These features can serve as electronic
fingerprints for the identification of individual bases in scanning
tunneling spectroscopy (STS) experiments that perform image and site
dependent spectroscopy on biomolecules. Thus the fingerprints of DNA-graphene
hybrid structures may provide an alternative route to DNA sequencing
using STS
Electronic Fingerprints of DNA Bases on Graphene
We calculate the electronic local density of states (LDOS)
of DNA
nucleotide bases (A,C,G,T), deposited on graphene. We observe significant
base-dependent features in the LDOS in an energy range within a few
electronvolts of the Fermi level. These features can serve as electronic
fingerprints for the identification of individual bases in scanning
tunneling spectroscopy (STS) experiments that perform image and site
dependent spectroscopy on biomolecules. Thus the fingerprints of DNA-graphene
hybrid structures may provide an alternative route to DNA sequencing
using STS
Electronic Fingerprints of DNA Bases on Graphene
We calculate the electronic local density of states (LDOS)
of DNA
nucleotide bases (A,C,G,T), deposited on graphene. We observe significant
base-dependent features in the LDOS in an energy range within a few
electronvolts of the Fermi level. These features can serve as electronic
fingerprints for the identification of individual bases in scanning
tunneling spectroscopy (STS) experiments that perform image and site
dependent spectroscopy on biomolecules. Thus the fingerprints of DNA-graphene
hybrid structures may provide an alternative route to DNA sequencing
using STS
Electronic Fingerprints of DNA Bases on Graphene
We calculate the electronic local density of states (LDOS)
of DNA
nucleotide bases (A,C,G,T), deposited on graphene. We observe significant
base-dependent features in the LDOS in an energy range within a few
electronvolts of the Fermi level. These features can serve as electronic
fingerprints for the identification of individual bases in scanning
tunneling spectroscopy (STS) experiments that perform image and site
dependent spectroscopy on biomolecules. Thus the fingerprints of DNA-graphene
hybrid structures may provide an alternative route to DNA sequencing
using STS
Fabrication of a Microcavity Prepared by Remote Epitaxy over Monolayer Molybdenum Disulfide
Advances in epitaxy have enabled
the preparation of high-quality
material architectures consisting of incommensurate components. Remote
epitaxy based on lattice transparency of atomically thin graphene
has been intensively studied for cost-effective advanced device manufacturing
and heterostructure formation. However, remote epitaxy on nongraphene
two-dimensional (2D) materials has rarely been studied even though
it has a broad and immediate impact on various disciplines, such as
many-body physics and the design of advanced devices. Herein, we report
remote epitaxy of ZnO on monolayer MoS2 and the realization
of a whispering-gallery-mode (WGM) cavity composed of a single crystalline
ZnO nanorod and monolayer MoS2. Cross-sectional transmission
electron microscopy and first-principles calculations revealed that
the nongraphene 2D material interacted with overgrown and substrate
layers and also exhibited lattice transparency. The WGM cavity embedding
monolayer MoS2 showed enhanced luminescence of MoS2 and multimodal emission
Solution-Processed n‑Type Graphene Doping for Cathode in Inverted Polymer Light-Emitting Diodes
n-Type
doping with (4-(1,3-dimethyl-2,3-dihydro-1H-benzoimidazol-2-yl)phenyl)
dimethylamine (N-DMBI) reduces a work function (WF) of graphene by
∼0.45 eV without significant reduction of optical transmittance.
Solution process of N-DMBI on graphene provides effective n-type doping
effect and air-stability at the same time. Although neutral N-DMBI
act as an electron receptor leaving the graphene p-doped, radical
N-DMBI acts as an electron donator leaving the graphene n-doped, which
is demonstrated by density functional theory. We also verify the suitability
of N-DMBI-doped n-type graphene for use as a cathode in inverted polymer
light-emitting diodes (PLEDs) by using various analytical methods.
Inverted PLEDs using a graphene cathode doped with N-DMBI radical
showed dramatically improved device efficiency (∼13.8 cd/A)
than did inverted PLEDs with pristine graphene (∼2.74 cd/A).
N-DMBI-doped graphene can provide a practical way to produce graphene
cathodes with low WF in various organic optoelectronics