Additional file 2 of NucHMM: a method for quantitative modeling of nucleosome organization identifying functional nucleosome states distinctly associated with splicing potentiality

Additional file 2. The lists of cell type-specific NucSs-genes for MCF7

Additional file 4 of NucHMM: a method for quantitative modeling of nucleosome organization identifying functional nucleosome states distinctly associated with splicing potentiality

Additional file 4. The lists of cell type-specific NucSs-genes for IMR90

Additional file 3 of NucHMM: a method for quantitative modeling of nucleosome organization identifying functional nucleosome states distinctly associated with splicing potentiality

Additional file 3. The lists of cell type-specific NucSs-genes for H1

Additional file 5 of NucHMM: a method for quantitative modeling of nucleosome organization identifying functional nucleosome states distinctly associated with splicing potentiality

Additional file 5. Review history

Additional file 1 of NucHMM: a method for quantitative modeling of nucleosome organization identifying functional nucleosome states distinctly associated with splicing potentiality

Additional file 1. NucHMM: a method for quantitative modeling of nucleosome organization identifying functional nucleosome states distinctly associated with splicing potentiality: Suppl. Notes, Figures and Tables

Additional file 1: of Integrative analysis reveals functional and regulatory roles of H3K79me2 in mediating alternative splicing

Supplemental Tables S1–S4. (PDF 88 kb

One-step microwave synthesis of FeSe₂@CNT as high-performance supercapacitor anode material

In this work, FeSe2@CNT nanocomposite anode materials are fabricated using a convenient and efficient one-step microwave method. The FeSe2@CNT electrode exhibits superior electrochemical performance. The carbon nanotube structure effectively mitigates the severe volume change in the FeSe2@CNT electrode during continuous charge and discharge. Thus, the capacitance value of 573 F g−1 and capacitance retention of 81.9% for 3000 constant current charge and discharge cycles are achieved. In addition, the asymmetric device assembled with FeSe2@CNT as the anode and NiSe2@CNT as the cathode exhibits high Energy density (E can reach 41.32 Wh kg−1 when P is 800 W kg−1), and the device achieves 82.6% capacity retention after 3000 cycles.</p

Additional file 2: of Integrative analysis reveals functional and regulatory roles of H3K79me2 in mediating alternative splicing

Supplemental Figures S1–S11. (PDF 2762 kb

Palladium-Catalyzed Decarbonylative Annulation of 2‑Arylbenzoic Acids with Internal Alkynes toward Phenanthrenes

A palladium-catalyzed decarbonylative annulation of 2-arylbenzoic acids with internal alkynes via C­(sp2)–H activation has been developed. A series of phenanthrenes were produced in moderate to good yield with good functional group tolerance. The mechanism study indicated that the C­(sp2)–H activation should be the rate-determining step during the reaction

Fabrication of Polydiacetylene Liposome Chemosensor with Enhanced Fluorescent Self-Amplification and Its Application for Selective Detection of Cationic Surfactants

Polydiacetylene (PDA) materials have been adopted as one of the powerful conjugated polymers for sensing applications due to their unique optical properties. In this paper, we present a new PDA liposome-based sensor system with enhanced fluorescent self-amplification by tuning a fluorophore fluorescence emission. In this system, a 1,8-naphthalimide derivative employed as a highly fluorescent fluorophore was incorporated into a PDA supermolecule. During the formation of blue PDA liposomes, the fluorescence emission of the fluorophore can be directly quenched, while thermal-induced phase transition of PDA liposomes from blue to red can readily restore this fluorescence emission. These phenomena could be ascribed to the tunable Förster energy transfer between the excited fluorophore and PDA conjugated framework. To demonstrate the sensing performance of this newly prepared PDA liposome-based sensor, the sensor with fluorescent self-amplification was successfully applied for the detection of cationic surfactants (CS). The results show that the PDA liposomes displayed a distinct color change and fluorescence restoration in the presence of cationic surfactant species, and allowed detection of cationic surfactants with high sensitivity and selectivity. The limit of detection for target CS, such as cetyltrimethylammonium bromide (CTAB), can reach as low as 184 nM. Compared to the traditional methods based on colorimetric PDA liposomes, this newly fabricated PDA sensor system was superior for sensitivity. Thus, our findings offer an avenue for the design and development of new types of PDA sensors with enhanced sensitivity