4 research outputs found
Evaluation Procedure of Electrostatic Potential in 3D-RISM-SCF Method and Its Application to Hydrolyses of Cis- and Transplatin Complexes
In the three-dimensional reference interaction site model
self-consistent
field (3D-RISM-SCF) method, a switching function was introduced to
evaluate the electrostatic potential (ESP) around the solute to smoothly
connect the ESP directly calculated with the solute electronic wave
function and that approximately calculated with solute point charges.
Hydrolyses of cis- and transplatins, <i>cis</i>- and <i>trans</i>-PtCl<sub>2</sub>(NH<sub>3</sub>)<sub>2</sub>, were
investigated with this method. Solute geometries were optimized at
the DFT level with the M06-2X functional, and free energy changes
were calculated at the CCSDÂ(T) level. In the first hydrolysis, the
calculated activation free energy is 20.8 kcal/mol for cisplatin and
20.3 kcal/mol for transplatin, which agrees with the experimental
and recently reported theoretical results. A Cl anion, which is formed
by the first hydrolysis, somehow favorably exists in the first solvation
shell as a counteranion. The second hydrolysis occurs with a similar
activation free energy (20.9 kcal/mol) for cisplatin but a somewhat
larger energy (23.2 kcal/mol) for transplatin to afford <i>cis</i>- and <i>trans</i>-diaqua complexes. The Cl counteranion
in the first solvation shell little influences the activation free
energy but somewhat decreases the endothermicity in both cis- and
transplatins. The present 3D-RISM-SCF method clearly displays the
microscopic solvation structure and its changes in the hydrolysis,
which are discussed in detail
3D-RISM-MP2 Approach to Hydration Structure of Pt(II) and Pd(II) Complexes: Unusual H‑Ahead Mode vs Usual O‑Ahead One
Solvation of transition metal complexes
with water has been one
of the fundamental topics in physical and coordination chemistry.
In particular, PtÂ(II) complexes have recently attracted considerable
interest for their relation to anticancer activity in cisplatin and
its analogues, yet the interaction of the water molecule and the metal
center has been obscured. The challenge from a theoretical perspective
remains that both the microscopic solvation effect and the dynamical
electron correlation (DEC) effect have to be treated simultaneously
in a reasonable manner. In this work we derive the analytical gradient
for the three-dimensional reference interaction site model Møller–Plesset
second order (3D-RISM-MP2) free energy. On the basis of the three-regions
3D-RISM self-consistent field (SCF) method recently proposed by us,
we apply a new layer of the Z-vector method to the CP-RISM equation
as well as point-charge approximation to the derivatives with respect
to the density matrix elements in the RISM-CPHF equation to remarkably
reduce the computational cost. This method is applied to study the
interaction of H<sub>2</sub>O with the d<sup>8</sup> square planar
transition metal complexes in aqueous solution, trans-[Pt<sup>II</sup>Cl<sub>2</sub>(NH<sub>3</sub>)Â(glycine)] (<b>1a</b>), [Pt<sup>II</sup>(NH<sub>3</sub>)<sub>4</sub>]<sup>2+</sup> (<b>1b</b>), [Pt<sup>II</sup>(CN)<sub>4</sub>]<sup>2–</sup> (<b>1c</b>), and their PdÂ(II) analogues <b>2a</b>, <b>2b</b>, and <b>2c</b>, respectively, to elucidate whether the usual H<sub>2</sub>O interaction through O atom (O-ahead mode) or unusual one through
H atom (H-ahead mode) is stable in these complexes. We find that the
interaction energy of the coordinating water and the transition metal
complex changes little when switching from gas to aqueous phase, but
the solvation free energy differs remarkably between the two interaction
modes, thereby affecting the relative stability of the H-ahead and
O-ahead modes. Particularly, in contrast to the expectation that the
O-ahead mode is preferred due to the presence of positive charges
in <b>1b</b>, the H-ahead mode is also found to be more stable.
The O-ahead mode is found to be more stable than the H-ahead one only
in <b>2b</b>. The energy decomposition analysis (EDA) at the
3D-RISM-MP2 level revealed that the O-ahead mode is stabilized by
the electrostatic (ES) interaction, whereas the H-ahead one is mainly
stabilized by the DEC effect. The ES interaction is also responsible
for the difference between the PdÂ(II) and PtÂ(II) complexes; because
the electrostatic potential is more negative along the <i>z</i>-axis in the PtÂ(II) complex than in the PdÂ(II) one, the O-ahead mode
prefers the PdÂ(II) complexes, whereas the H-ahead becomes predominant
in the PtÂ(II) complexes
Like-Charge Attraction of Molecular Cations in Water: Subtle Balance between Interionic Interactions and Ionic Solvation Effect
Despite strong electrostatic repulsion,
like-charged ions in aqueous
solution can effectively attract each other via ion–water interactions.
In this paper we investigate such an effective interaction of like-charged
ions in water by using the 3D-RISM-SCF method (i.e., electronic structure
theory combined with three-dimensional integral equation theory for
molecular solvents). Free energy profiles are calculated at the CCSDÂ(T)
level for a series of molecular ions including guanidinium (Gdm<sup>+</sup>), alkyl-substituted ammonium, and aromatic amine cations.
Polarizable continuum model (PCM) and mean-field QM/MM free energy
calculations are also performed for comparison. The results show that
the stability of like-charged ion pairs in aqueous solution is determined
by a very subtle balance between interionic interactions (including
dispersion and π-stacking interactions) and ionic solvation/hydrophobic
effects and that the Gdm<sup>+</sup> ion has a rather favorable character
for like-charge association among all the cations studied. Furthermore,
we investigate the like-charge pairing in Arg-Ala-Arg and Lys-Ala-Lys
tripeptides in water and show that the Arg-Arg pair has a contact
free-energy minimum of about −6 kcal/mol. This result indicates
that arginine pairing observed on protein surfaces and interfaces
is stabilized considerably by solvation effects
Theoretical Study of One-Electron Oxidized Mn(III)– and Ni(II)–Salen Complexes: Localized vs Delocalized Ground and Excited States in Solution
One-electron oxidized MnÂ(III)–
and NiÂ(II)–salen complexes
exhibit unique mixed-valence electronic structures and charge transfer
(CT) absorption spectra. We theoretically investigated them to elucidate
the reason why the MnÂ(III)–salen complex takes a localized
electronic structure (class II mixed valence compound by Robin–Day
classification) and the NiÂ(II)-analogue has a delocalized one (class
III) in solution, where solvation effect was taken into consideration
either by the three-dimensional reference interaction site model self-consistent
field (3D-RISM-SCF) method or by the mean-field (MF) QM/MM-MD simulation.
The geometries of these complexes were optimized by the 3D-RISM-SCF-U-DFT/M06.
The vertical excitation energy and the oscillator strength of the
first excited state were evaluated by the general multiconfiguration
reference quasi-degenerate perturbation theory (GMC-QDPT), including
the solvation effect based on either 3D-RISM-SCF- or MF-QM/MM-MD-optimized
solvent distribution. The computational results well agree with the
experimentally observed absorption spectra and the experimentally
proposed electronic structures. The one-electron oxidized MnÂ(III)–salen
complex with a symmetrical salen ligand belongs to the class II, as
experimentally reported, in which the excitation from the phenolate
anion to the phenoxyl radical moiety occurs. In contrast, the one-electron
oxidized NiÂ(II)–salen complex belongs to the class III, in
which the excitation occurs from the doubly occupied delocalized π<sub>1</sub> orbital of the salen radical to the singly occupied delocalized
π<sub>2</sub> orbital; the π<sub>1</sub> is a bonding
combination of the HOMOs of two phenolate moieties and the π<sub>2</sub> is an antibonding combination. Solvation effect is indispensable
for correctly describing the mixed-valence character, the geometrical
distortion, and the intervalence CT absorption spectra of these complexes.
The number of d electrons and the d orbital energy level play crucial
roles to provide the localization/delocalization character of these
complexes