Energy transfer efficiency in the FMO complex strongly coupled to a vibronic mode

Using methods of condensed matter and statistical physics, we examine the transport of excitons through the Fenna-Matthews-Olson (FMO) complex from a receiving antenna to a reaction center. Writing the equations of motion for the exciton creation/annihilation operators, we are able to describe the exciton dynamics, even in the regime when the reorganization energy is of the order of the intra-system couplings. In particular, we obtain the well-known quantum oscillations of the site populations. We determine the exciton transfer efficiency in the presence of a quenching field and protein environment. While the majority of the protein vibronic modes are treated as a heat bath, we address the situation when specific modes are strongly coupled to excitons and examine the effects of these modes on the quantum oscillations and the energy transfer efficiency. We find that, for the vibronic frequencies below 16 meV, the exciton transfer is drastically suppressed. We attribute this effect to the formation of "polaronic states" where the exciton is transferred back and forth between the two pigments with the absorption/emission of the vibronic quanta, instead of proceeding to the reaction center. The same effect suppresses the quantum beating at the vibronic frequency of 25 meV. We also show that the efficiency of the energy transfer can be enhanced when the vibronic mode strongly couples to the third pigment only, instead of coupling to the entire system

Dirac gap-induced graphene quantum dot in an electrostatic potential

A spatially modulated Dirac gap in a graphene sheet leads to charge confinement, thus enabling a graphene quantum dot to be formed without the application of external electric and magnetic fields [Appl. Phys. Lett. \textbf{97}, 243106 (2010)]. This can be achieved provided the Dirac gap has a local minimum in which the states become localised. In this work, the physics of such a gap-induced dot is investigated in the continuum limit by solving the Dirac equation. It is shown that gap-induced confined states couple to the states introduced by an electrostatic quantum well potential. Hence the region in which the resulting hybridized states are localised can be tuned with the potential strength, an effect which involves Klein tunneling. The proposed quantum dot may be used to probe quasi-relativistic effects in graphene, while the induced confined states may be useful for graphene-based nanostructures.Comment: 12 pages, 7 figure

Certainty in Heisenberg's uncertainty principle: Revisiting definitions for estimation errors and disturbance

We revisit the definitions of error and disturbance recently used in error-disturbance inequalities derived by Ozawa and others by expressing them in the reduced system space. The interpretation of the definitions as mean-squared deviations relies on an implicit assumption that is generally incompatible with the Bell-Kochen-Specker-Spekkens contextuality theorems, and which results in averaging the deviations over a non-positive-semidefinite joint quasiprobability distribution. For unbiased measurements, the error admits a concrete interpretation as the dispersion in the estimation of the mean induced by the measurement ambiguity. We demonstrate how to directly measure not only this dispersion but also every observable moment with the same experimental data, and thus demonstrate that perfect distributional estimations can have nonzero error according to this measure. We conclude that the inequalities using these definitions do not capture the spirit of Heisenberg's eponymous inequality, but do indicate a qualitatively different relationship between dispersion and disturbance that is appropriate for ensembles being probed by all outcomes of an apparatus. To reconnect with the discussion of Heisenberg, we suggest alternative definitions of error and disturbance that are intrinsic to a single apparatus outcome. These definitions naturally involve the retrodictive and interdictive states for that outcome, and produce complementarity and error-disturbance inequalities that have the same form as the traditional Heisenberg relation.Comment: 15 pages, 8 figures, published versio