Detection of circumstellar CH2CHCN, CH2CN, CH3CCH and H2CS

We report on the detection of vinyl cyanide (CH2CHCN), cyanomethyl radical (CH2CN), methylacetylene (CH3CCH) and thioformaldehyde (H2CS) in the C-rich star IRC +10216. These species, which are all known to exist in dark clouds, are detected for the first time in the circumstellar envelope around an AGB star. The four molecules have been detected trough pure rotational transitions in the course of a 3 mm line survey carried out with the IRAM 30-m telescope. The molecular column densities are derived by constructing rotational temperature diagrams. A detailed chemical model of the circumstellar envelope is used to analyze the formation of these molecular species. We have found column densities in the range 5 x 10^(12)- 2 x 10^(13) cm^(-2), which translates to abundances relative to H2 of several 10^(-9). The chemical model is reasonably successful in explaining the derived abundances through gas phase synthesis in the cold outer envelope. We also find that some of these molecules, CH2CHCN and CH2CN, are most probably excited trough infrared pumping to excited vibrational states. The detection of these species stresses the similarity between the molecular content of cold dark clouds and C-rich circumstellar envelopes. However, some differences in the chemistry are indicated by the fact that in IRC +10216 partially saturated carbon chains are present at a lower level than those which are highly unsaturated, while in TMC-1 both types of species have comparable abundances.Comment: 9 pages, 5 figures; accepted for publication in A&

The Abundances Of Polyacetylenes Toward CRL618

We present a mid-infrared high spectral resolution spectrum of CRL618 in the frequency ranges 778-784 and 1227-1249 cm(-1) (8.01-8.15 and 12.75-12.85 mu m) taken with the Texas Echelon-cross-Echelle Spectrograph (TEXES) and the Infrared Telescope Facility (IRTF). We have identified more than 170 rovibrational lines arising from C2H2, HCN, C4H2, and C6H2. We have found no unmistakable trace of C8H2. The line profiles display a complex structure suggesting the presence of polyacetylenes in several components of the circumstellar envelope (CSE). We derive total column densities of 2.5x10(17), 3.1x10(17), 2.1x10(17), 9.3x10(16) cm(-2), and less than or similar to 5x10(16) cm(-2) for HCN, C2H2, C4H2, C6H2, and C8H2, respectively. The observations indicate that both the rotational and vibrational temperatures in the innermost CSE depend on the molecule, varying from 100 to 350 K for the rotational temperatures and 100 to 500 K for the vibrational temperatures. Our results support a chemistry in the innermost CSE based on radical-neutral reactions triggered by the intense UV radiation field.Spanish Ministerio de Educacion y Ciencia ESP2004-665, AYA2003-2785"Comunidad de Madrid" government S-0505/ESP-0237European Community MCRTN-CT-2004-51230CSICCONACyT SEP-2004-C01-47090UNAMNSF AST-0708074Astronom

The abundance of 28Si32S, 29Si32S, 28Si34S, and 30Si32S in the inner layers of the envelope of IRC+10216

We present high spectral resolution mid-IR observations of SiS towards the C-rich AGB star IRC+10216 carried out with the Texas Echelon-cross-Echelle Spectrograph mounted on the NASA Infrared Telescope Facility. We have identified 204 ro-vibrational lines of 28Si32S, 26 of 29Si32S, 20 of 28Si34S, and 15 of 30Si32S in the frequency range 720-790 cm-1. These lines belong to bands v=1-0, 2-1, 3-2, 4-3, and 5-4, and involve rotational levels with Jlow<90. About 30 per cent of these lines are unblended or weakly blended and can be partially or entirely fitted with a code developed to model the mid-IR emission of a spherically symmetric circumstellar envelope composed of expanding gas and dust. The observed lines trace the envelope at distances to the star <35R* (~0.7 arcsec). The fits are compatible with an expansion velocity of 1+2.5(r/R*-1) km/s between 1 and 5R*, 11 km/s between 5 and 20R*, and 14.5 km/s outwards. The derived abundance profile of 28Si32S with respect to H2 is 4.9e-6 between the stellar photosphere and 5R*, decreasing linearly to 1.6e-6 at 20R* and to 1.3e-6 at 50R*. 28Si32S seems to be rotationally under LTE in the region of the envelope probed with our observations and vibrationally out of LTE in most of it. There is a red-shifted emission excess in the 28Si32S lines of band v=1-0 that cannot be found in the lines of bands v=2-1, 3-2, 4-3, and 5-4. This excess could be explained by an enhancement of the vibrational temperature around 20R* behind the star. The derived isotopic ratios 28Si/29Si, and 32S/34S are 17 and 14, compatible with previous estimates.Comment: 11 pages, 5 figures, and 4 tables. Accepted for publication in MNRA

A Detailed Analysis of the Dust Formation Zone of IRC+10216 Derived from Mid-IR Bands of C2H2 and HCN

A spectral survey of IRC+10216 has been carried out in the range 11 to 14 um with a spectral resolution of about 4 km s^-1. We have identified a forest of lines in six bands of C2H2 involving the vibrational states from the ground to 3nu5 and in two bands of HCN, involving the vibrational states from the ground up to 2nu2. Some of these transitions are observed also in H13CCH and H13CN. We have estimated the kinetic, vibrational, and rotational temperatures, and the abundances and column densities of C2H2 and HCN between 1 and 300 R* (1.5E16 cm) by fitting about 300 of these ro-vibrational lines. The envelope can be divided into three regions with approximate boundaries at 0.019 arcsec (the stellar photosphere), 0.1 arcsec (the inner dust formation zone), and 0.4 arcsec (outer dust formation zone). Most of the lines might require a large microturbulence broadening. The derived abundances of C2H2 and HCN increase by factors of 10 and 4, respectively, from the innermost envelope outwards. The derived column densities for both C2H2 and HCN are 1.6E19 cm^-2. Vibrational states up to 3000 K above ground are populated, suggesting pumping by near-infrared radiation from the star and innermost envelope. Low rotational levels can be considered under LTE while those with J>20-30 are not thermalized. A few lines require special analysis to deal with effects like overlap with lines of other molecules.Comment: 8 pages, 16 figures, 2 machine-readable tables, accepted in the Astrophysical Journa

Gas infall and possible circumstellar rotation in R Leonis

We present new interferometer molecular observations of R Leo taken at 1.2 mm with the Atacama Large Millimeter Array with an angular resolution up to similar or equal to 0.\u27\u27 026. These observations permitted us to resolve the innermost envelope of this star, which revealed a complex structure that involves extended continuum emission and molecular emission showing a non-radial gas velocity distribution. This molecular emission displays prominent red-shifted absorptions located immediately in front of the star, which are typical footprints of material infall. This emission also shows lateral gas motions compatible with a torus-like structure

A Detailed Analysis Of The Dust Formation Zone Of Irc+10216 Derived From Mid-Infrared Bands Of C2H2 And HCN

A spectral survey of IRC + 10216 has been carried out in the range 11-14 mu m with a spectral resolution of about 4 km s(-1). We have identified a forest of lines in six bands of C2H2 involving the vibrational states from the ground to 3 nu(5) and in two bands of HCN, involving the vibrational states from the ground up to 2 nu(2). Some of these transitions are observed also in (HCCH)-C-13 and (HCN)-C-13. We have estimated the kinetic, vibrational, and rotational temperatures and the abundances and column densities of C2H2 and HCN between 1R* and 300R* (similar or equal to 1.5 x 10(16) cm) by fitting about 300 of these rovibrational lines. The envelope can be divided into three regions with approximate boundaries at 0.019" (the stellar photosphere), 0.1" (the inner dust formation zone), and 0.4" (outer dust formation zone). Most of the lines might require a large microturbulence broadening. The derived abundances of C2H2 and HCN increase by factors of 10 and 4, respectively, from the innermost envelope outward. The derived column densities for both C2H2 and HCN are similar or equal to 1.6 x 10(19) cm(-2). Vibrational states up to 3000 K above ground are populated, suggesting pumping by near-infrared radiation from the star and innermost envelope. Low rotational levels can be considered under LTE, while those with J > 20-30 are not thermalized. A few lines require special analysis to deal with effects like overlap with lines of other molecules.Spanish Ministerio de Educacio�n y Ciencia ESP2004-665, AYA2003-2785Comunidad de Madrid S-0505/ESP-0237AST 03-07497NSFUSRAAstronom

Danger- and pathogen-associated molecular patterns recognition by pattern-recognition receptors and ion channels of the transient receptor potential family triggers the inflammasome activation in immune cells and sensory neurons.

An increasing number of studies show that the activation of the innate immune system and inflammatory mechanisms play an important role in the pathogenesis of numerous diseases. The innate immune system is present in almost all multicellular organisms and its activation occurs in response to pathogens or tissue injury via pattern-recognition receptors (PRRs) that recognize pathogen-associated molecular patterns (PAMPs) or danger-associated molecular patterns (DAMPs). Intracellular pathways, linking immune and inflammatory response to ion channel expression and function, have been recently identified. Among ion channels, the transient receptor potential (TRP) channels are a major family of non-selective cation-permeable channels that function as polymodal cellular sensors involved in many physiological and pathological processes.In this review, we summarize current knowledge of interactions between immune cells and PRRs and ion channels of TRP families with PAMPs and DAMPs to provide new insights into the pathogenesis of inflammatory diseases. TRP channels have been found to interfere with innate immunity via both nuclear factor-kB and procaspase-1 activation to generate the mature caspase-1 that cleaves pro-interleukin-1ß cytokine into the mature interleukin-1ß.Sensory neurons are also adapted to recognize dangers by virtue of their sensitivity to intense mechanical, thermal and irritant chemical stimuli. As immune cells, they possess many of the same molecular recognition pathways for danger. Thus, they express PRRs including Toll-like receptors 3, 4, 7, and 9, and stimulation by Toll-like receptor ligands leads to induction of inward currents and sensitization in TRPs. In addition, the expression of inflammasomes in neurons and the involvement of TRPs in central nervous system diseases strongly support a role of TRPs in inflammasome-mediated neurodegenerative pathologies. This field is still at its beginning and further studies may be required.Overall, these studies highlight the therapeutic potential of targeting the inflammasomes in proinflammatory, autoinflammatory and metabolic disorders associated with undesirable activation of the inflammasome by using specific TRP antagonists, anti-human TRP monoclonal antibody or different molecules able to abrogate the TRP channel-mediated inflammatory signals

Silicon in the dust formation zone of IRC +10216 as observed with PACS and SPIRE on board Herschel

The interstellar medium is enriched primarily by matter ejected from evolved low and intermediate mass stars. The outflows from these stars create a circumstellar envelope in which a rich gas-phase and dust-nucleation chemistry takes place. We observed the nearest carbon-rich evolved star, IRC+10216, using the PACS (55-210 {\mu}m) and SPIRE (194-672 {\mu}m) spectrometers on board Herschel. We find several tens of lines from SiS and SiO, including lines from the v=1 vibrational level. For SiS these transitions range up to J=124-123, corresponding to energies around 6700K, while the highest detectable transition is J=90-89 for SiO, which corresponds to an energy around 8400K. Both species trace the dust formation zone of IRC+10216, and the broad energy ranges involved in their detected transitions permit us to derive the physical properties of the gas and the particular zone in which each species has been formed. This allows us to check the accuracy of chemical thermodynamical equilibrium models and the suggested depletion of SiS and SiO due to accretion onto dust grains

Poly(ADP-ribose)glycohydrolase is an upstream regulator of Ca2+ fluxes in oxidative cell death

Oxidative DNA damage to cells activates poly(ADP-ribose)polymerase-1 (PARP-1) and the poly(ADP-ribose) formed is rapidly degraded to ADP-ribose by poly(ADP-ribose)glycohydrolase (PARG). Here we show that PARP-1 and PARG control extracellular Ca2+ fluxes through melastatin-like transient receptor potential 2 channels (TRPM2) in a cell death signaling pathway. TRPM2 activation accounts for essentially the entire Ca2+ influx into the cytosol, activating caspases and causing the translocation of apoptosis inducing factor (AIF) from the inner mitochondrial membrane to the nucleus followed by cell death. Abrogation of PARP-1 or PARG function disrupts these signals and reduces cell death. ADP-ribose-loading of cells induces Ca2+ fluxes in the absence of oxidative damage, suggesting that ADP-ribose is the key metabolite of the PARP-1/PARG system regulating TRPM2. We conclude that PARP-1/PARG control a cell death signal pathway that operates between five different cell compartments and communicates via three types of chemical messengers: a nucleotide, a cation, and proteins