6 research outputs found
Reaction Pathways of Proton Transfer in Hydrogen-Bonded Phenol–Carboxylate Complexes Explored by Combined UV–Vis and NMR Spectroscopy
Combined low-temperature NMR/UV–vis spectroscopy (UVNMR), where optical and NMR spectra are measured in the NMR spectrometer under the same conditions, has been set up and applied to the study of H-bonded anions A··H··X– (AH = 1-13C-2-chloro-4-nitrophenol, X– = 15 carboxylic acid anions, 5 phenolates, Cl–, Br–, I–, and BF4–). In this series, H is shifted from A to X, modeling the proton-transfer pathway. The 1H and 13C chemical shifts and the H/D isotope effects on the latter provide information about averaged H-bond geometries. At the same time, red shifts of the π–π* UV–vis absorption bands are observed which correlate with the averaged H-bond geometries. However, on the UV–vis time scale, different tautomeric states and solvent configurations are in slow exchange. The combined data sets indicate that the proton transfer starts with a H-bond compression and a displacement of the proton toward the H-bond center, involving single-well configurations A–H···X–. In the strong H-bond regime, coexisting tautomers A··H···X– and A–···H··X are observed by UV. Their geometries and statistical weights change continuously when the basicity of X– is increased. Finally, again a series of single-well structures of the type A–···H–X is observed. Interestingly, the UV–vis absorption bands are broadened inhomogeneously because of a distribution of H-bond geometries arising from different solvent configurations
Solvent and H/D Isotope Effects on the Proton Transfer Pathways in Heteroconjugated Hydrogen-Bonded Phenol-Carboxylic Acid Anions Observed by Combined UV–vis and NMR Spectroscopy
Heteroconjugated hydrogen-bonded
anions A···H···X<sup>–</sup> of
phenols (AH) and carboxylic/inorganic acids (HX)
dissolved in CD<sub>2</sub>Cl<sub>2</sub> and CDF<sub>3</sub>/CDF<sub>2</sub>Cl have been studied by combined low-temperature UV–vis
and <sup>1</sup>H/<sup>13</sup>C NMR spectroscopy (UVNMR). The systems
constitute small molecular models of hydrogen-bonded cofactors in
proteins such as the photoactive yellow protein (PYP). Thus, the phenols
studied include the PYP cofactor 4-hydroxycinnamic acid methyl thioester,
and the more acidic 4-nitrophenol and 2-chloro-4-nitrophenol which
mimic electronically excited cofactor states. It is shown that the <sup>13</sup>C chemical shifts of the phenolic residues of A···H···X<sup>–</sup>, referenced to the corresponding values of A···H···A<sup>–</sup>, constitute excellent probes for the average proton
positions. These shifts correlate with those of the H-bonded protons,
as well as with the H/D isotope effects on the <sup>13</sup>C chemical
shifts. A combined analysis of UV–vis and NMR data was employed
to elucidate the proton transfer pathways in a qualitative way. Dual
absorption bands of the phenolic moiety indicate a double-well situation
for the shortest OHO hydrogen bonds studied. Surprisingly, when the
solvent polarity is low the carboxylates are protonated whereas the
proton shifts toward the phenolic oxygens when the polarity is increased.
This finding indicates that because of stronger ion-dipole interactions
small anions are stabilized at high solvent polarity and large anions
exhibiting delocalized charges at low solvent polarities. It also
explains the large acidity difference of phenols and carboxylic acids
in water, and the observation that this difference is strongly reduced
in the interior of proteins when both partners form mutual hydrogen
bonds
Two-Dimensional UV–vis/NMR Correlation Spectroscopy: A Heterospectral Signal Assignment of Hydrogen-Bonded Complexes
We explore in a combined UV–vis/NMR approach the hydrogen-bonded complexes of 2-chloro-4-nitrophenol (CNP) with acetate anion as a model for amino acid side-chain interactions. For the first time, we present two-dimensional UV–vis/NMR correlation spectra, measured simultaneously for the same sample inside of the magnet of a NMR spectrometer. Synchronous and asynchronous 2D plots allow us to monitor the formation of hydrogen-bonded complexes, assign the signals to specific species, and finally estimate the geometry of a hydrogen-bonded 1:1 heteroconjugated anion coexisting with four other anionic species formed in CD<sub>2</sub>Cl<sub>2</sub> solution at 180 K. Combined analysis of NMR and UV–vis spectra with the help of previously published hydrogen-bond correlations shows that the hydrogen bond in the heteroconjugate is of the CNP–O<sup>–</sup>···HOOCCH<sub>3</sub> type with <i>r</i>(O···O) ≈ 2.48 Å and the average bridging proton displacement from the hydrogen bond center of about 0.18 Å
Geometries and Tautomerism of OHN Hydrogen Bonds in Aprotic Solution Probed by H/D Isotope Effects on <sup>13</sup>C NMR Chemical Shifts
The 1H and 13C NMR spectra of 17 OHN hydrogen-bonded complexes formed by CH313COOH(D) with 14 substituted pyridines, 2 amines, and N-methylimidazole have been measured in the temperature region between 110 and 150 K using CDF3/CDF2Cl mixture as solvent. The slow proton and hydrogen bond exchange regime was reached, and the H/D isotope effects on the 13C chemical shifts of the carboxyl group were measured. In combination with the analysis of the corresponding 1H chemical shifts, it was possible to distinguish between OHN hydrogen bonds exhibiting a single proton position and those exhibiting a fast proton tautomerism between molecular and zwitterionic forms. Using H-bond correlations, we relate the H/D isotope effects on the 13C chemical shifts of the carboxyl group with the OHN hydrogen bond geometries
Correlating Photoacidity to Hydrogen-Bond Structure by Using the Local O–H Stretching Probe in Hydrogen-Bonded Complexes of Aromatic Alcohols
To
assess the potential use of O–H stretching modes of aromatic
alcohols as ultrafast local probes of transient structures and photoacidity,
we analyze the response of the O–H stretching mode in the 2-naphthol-acetonitrile
(2N–CH<sub>3</sub>CN) 1:1 complex after UV photoexcitation.
We combine femtosecond UV-infrared pump–probe spectroscopy
and a theoretical treatment of vibrational solvatochromic effects
based on the Pullin perturbative approach, parametrized at the density
functional theory (DFT) level. We analyze the effect of hydrogen bonding
on the vibrational properties of the photoacid–base complex
in the S<sub>0</sub> state, as compared to O–H stretching vibrations
in a wide range of substituted phenols and naphthols covering the
3000–3650 cm<sup>–1</sup> frequency range. Ground state
vibrational properties of these phenols and naphthols with various
substituent functional groups are analyzed in solvents of different
polarity and compared to the vibrational frequency shift of 2N induced
by UV photoexcitation to the <sup>1</sup>L<sub>b</sub> electronic
excited state. We find that the O–H stretching frequency shifts
follow a linear relationship with the solvent polarity function <i>F</i><sub>0</sub> = (2ε<sub>0</sub> – 2)/(2ε<sub>0</sub> + 1), where ε<sub>0</sub> is the static dielectric
constant of the solvent. These changes are directly correlated with
photoacidity trends determined by reported p<i>K</i><sub><i>a</i></sub> values and with structural changes in the
O···N and O–H hydrogen-bond distances induced
by solvation or photoexcitation of the hydrogen-bonded complexes
N–H Stretching Excitations in Adenosine-Thymidine Base Pairs in Solution: Pair Geometries, Infrared Line Shapes, and Ultrafast Vibrational Dynamics
We explore the N–H stretching vibrations of adenosine-thymidine
base pairs in chloroform solution with linear and nonlinear infrared
spectroscopy. Based on estimates from NMR measurements and ab initio
calculations, we conclude that adenosine and thymidine form hydrogen
bonded base pairs in Watson–Crick, reverse Watson–Crick,
Hoogsteen, and reverse Hoogsteen configurations with similar probability.
Steady-state concentration and temperature dependent linear FT-IR
studies, including H/D exchange experiments, reveal that these hydrogen-bonded
base pairs have complex N–H/N–D stretching spectra with
a multitude of spectral components. Nonlinear 2D-IR spectroscopic
results, together with IR-pump-IR-probe measurements, as also corroborated
by ab initio calculations, reveal that the number of N–H stretching
transitions is larger than the total number of N–H stretching
modes. This is explained by couplings to other modes, such as an underdamped
low-frequency hydrogen-bond mode, and a Fermi resonance with NH<sub>2</sub> bending overtone levels of the adenosine amino-group. Our
results demonstrate that modeling based on local N–H stretching
vibrations only is not sufficient and call for further refinement
of the description of the N–H stretching manifolds of nucleic
acid base pairs of adenosine and thymidine, incorporating a multitude
of couplings with fingerprint and low-frequency modes
