48 research outputs found
Table_1_Effects of physical activity and sedentary behaviors on cardiovascular disease and the risk of all-cause mortality in overweight or obese middle-aged and older adults.docx
AimThe aim of this study was to respectively explore the relationships between physical activity and sedentary behaviors and cardiovascular disease (CVD) and all-cause mortality risk in overweight/obese middle-aged and older patients, and also assess the interaction between physical activity and sedentary behaviors.MethodsData of middle-aged and older adults with body mass index (BMI) ≥25 kg/m2 were extracted from the National Health and Nutrition Examination Surveys (NHANES) database in 2007–2018 in this retrospective cohort study. Weighted univariate and multivariate logistic regression analyses were used to explore the associations between physical activity and sedentary behaviors and CVDs; weighted univariate and multivariate Cox regression analyses were used to explore the relationships between physical activity and sedentary behaviors with the risk of all-cause mortality. The interaction effect between physical activity and sedentary behaviors on CVD and all-cause mortality was also assessed. We further explored this interaction effect in subgroups of age and BMI. The evaluation indexes were odds ratios (ORs), hazard ratios (HRs), and 95% confidence intervals (CIs).ResultsAmong 13,699 eligible patients, 1,947 had CVD, and 1,560 died from all-cause mortality. After adjusting for covariates, patients who had high sedentary time seemed to have both high odds of CVD [OR = 1.24, 95% CI: (1.06–1.44)] and a high risk of all-cause mortality [HR = 1.20, 95% CI: (1.06–1.37)]. Furthermore, being insufficiently active was linked to high odds of CVD [OR = 1.24, 95% CI: (1.05–1.46)] as well as a high risk of all-cause mortality [HR = 1.32, 95% CI: (1.15–1.51)]. High sedentary time and being insufficiently active had an interaction effect on both high odds of CVD [OR = 1.44, 95% CI: (1.20–1.73)] and high risk of all-cause mortality [HR = 1.48, 95% CI: (1.24–1.76)]. Individuals of different ages with/without obesity need to focus on the potential CVD/mortality risk of high sedentary time and low physical activity (all P ConclusionReducing sedentary time combined with increasing physical activity may benefit health by reducing both the risk of CVD and all-cause mortality in overweight or obese middle-aged and older adults.</p
Discovery of Selective Small-Molecule Inhibitors for the β‑Catenin/T-Cell Factor Protein–Protein Interaction through the Optimization of the Acyl Hydrazone Moiety
Acyl
hydrazone is an important functional group for the discovery
of bioactive small molecules. This functional group is also recognized
as a pan assay interference structure. In this study, a new small-molecule
inhibitor for the β-catenin/Tcf protein–protein interaction
(PPI), ZINC02092166, was identified through AlphaScreen and FP assays.
This compound contains an acyl hydrazone group and exhibits higher
inhibitory activities in cell-based assays than biochemical assays.
Inhibitor optimization resulted in chemically stable derivatives that
disrupt the β-catenin/Tcf PPI. The binding mode of new inhibitors
was characterized by site-directed mutagenesis and structure–activity
relationship studies. This series of inhibitors with a new scaffold
exhibits dual selectivity for β-catenin/Tcf over β-catenin/cadherin
and β-catenin/APC PPIs. One derivative of this series suppresses
canonical Wnt signaling, downregulates the expression of Wnt target
genes, and inhibits the growth of cancer cells. This compound represents
a solid starting point for the development of potent and selective β-catenin/Tcf
inhibitors
Structure-Based Optimization of Small-Molecule Inhibitors for the β‑Catenin/B-Cell Lymphoma 9 Protein–Protein Interaction
Structure-based
optimization was conducted to improve the potency, selectivity, and
cell-based activities of β-catenin/B-cell lymphoma 9 (BCL9)
inhibitors based on the 4′-fluoro-<i>N</i>-phenyl-[1,1′-biphenyl]-3-carboxamide
scaffold, which was designed to mimic the side chains of the hydrophobic
α-helical hot spots at positions <i>i</i>, <i>i</i> + 3, and <i>i</i> + 7. Compound <b>29</b> was found to disrupt the β-catenin/BCL9 protein–protein
interaction (PPI) with a <i>K</i><sub>i</sub> of 0.47 ÎĽM
and >1900-fold selectivity for β-catenin/BCL9 over β-catenin/E-cadherin
PPIs. The proposed binding mode of new inhibitors was consistent with
the results of site-directed mutagenesis and structure–activity
relationship studies. Cell-based studies indicated that <b>29</b> disrupted the β-catenin/BCL9 interaction without affecting
the β-catenin/E-cadherin interaction, selectively suppressed
transactivation of Wnt/β-catenin signaling, downregulated expression
of Wnt target genes, and inhibited viability of Wnt/β-catenin-dependent
cancer cells in dose-dependent manners. A comparison of the biochemical
and cell-based assay results offered the directions for future inhibitor
optimization
Structure-Based Optimization of Small-Molecule Inhibitors for the β‑Catenin/B-Cell Lymphoma 9 Protein–Protein Interaction
Structure-based
optimization was conducted to improve the potency, selectivity, and
cell-based activities of β-catenin/B-cell lymphoma 9 (BCL9)
inhibitors based on the 4′-fluoro-<i>N</i>-phenyl-[1,1′-biphenyl]-3-carboxamide
scaffold, which was designed to mimic the side chains of the hydrophobic
α-helical hot spots at positions <i>i</i>, <i>i</i> + 3, and <i>i</i> + 7. Compound <b>29</b> was found to disrupt the β-catenin/BCL9 protein–protein
interaction (PPI) with a <i>K</i><sub>i</sub> of 0.47 ÎĽM
and >1900-fold selectivity for β-catenin/BCL9 over β-catenin/E-cadherin
PPIs. The proposed binding mode of new inhibitors was consistent with
the results of site-directed mutagenesis and structure–activity
relationship studies. Cell-based studies indicated that <b>29</b> disrupted the β-catenin/BCL9 interaction without affecting
the β-catenin/E-cadherin interaction, selectively suppressed
transactivation of Wnt/β-catenin signaling, downregulated expression
of Wnt target genes, and inhibited viability of Wnt/β-catenin-dependent
cancer cells in dose-dependent manners. A comparison of the biochemical
and cell-based assay results offered the directions for future inhibitor
optimization
GO categories of biological process, cellular component and molecular function for the transcriptome of the <i>A</i>. <i>sparsifolia</i> primary roots.
<p>The right y-axis shows the number of genes in a category, and the left y-axis indicates the percentage of a specific category of genes in that main category.</p
Effect of water stress induced by PEG-6000 on development of the <i>Alhagi sparsifolia</i> primary roots.
<p>(A) Seeds of <i>A</i>. <i>sparsifolia</i> (Scale bar = 2.0 cm). (B) Typical phenotype of the <i>A</i>. <i>sparsifolia</i> seedlings at 7 days post treatment with PEG-6000 (Scale bar = 1.0 cm). The <i>A</i>. <i>sparsifolia</i> seeds were first treated with concentrated sulfuric acid (98%) for 20 min, and then put on fully wetted filter paper at 25°C in the dark for 24 h. The germinated seeds were selected and transferred to petri dishes containing filter paper saturated with the different percentages of PEG-6000 solution (0, 90, 150, 220, 270 and 320 g/L), and were remained at 25°C in the dark for 3 days followed by 4 additional days but under 16-h light/8-h dark. At least 15 seedlings were included in each different treatment, and three independent experiments were preformed. (C) Average length of the primary roots of <i>A</i>. <i>sparsifolia</i> treated with PEG-6000 at 7 days. Error bars represent SE. P values determined by Student t test (** p < 0.01).</p
Summary of unigene annotations against public databases.
<p>Abbreviations: NR, non-redundant protein sequence; NT, non-redundant nucleotide; Pfam, Protein Family Database; KEGG, Kyoto Encyclopedia of Genes and Genomes database; KOG, euKaryotic Ortholog Groups; GO, Gene Ontology.</p><p>Summary of unigene annotations against public databases.</p
GO categories of biological process (BP), cellular component (CC) and molecular function (MF) for the early water-stress responding genes (P-6h <i>vs</i>. P-0h) in <i>A</i>. <i>sparsifolia</i> primary roots.
<p>(A) the early water-stress inducible genes; (B) the early water-stress repressed genes. The right y-axis shows the number of genes in a category, and the left y-axis indicates the percentage of a specific category of genes in that main category.</p
Rational Design of Selective Small-Molecule Inhibitors for β‑Catenin/B-Cell Lymphoma 9 Protein–Protein Interactions
Selective
inhibition of α-helix-mediated protein–protein
interactions (PPIs) with small organic molecules provides great potential
for the discovery of chemical probes and therapeutic agents. Protein
Data Bank data mining using the HippDB database indicated that (1)
the side chains of hydrophobic projecting hot spots at positions <i>i</i>, <i>i</i> + 3, and <i>i</i> + 7 of
an α-helix had few orientations when interacting with the second
protein and (2) the hot spot pockets of PPI complexes had different
sizes, shapes, and chemical groups when interacting with the same
hydrophobic projecting hot spots of α-helix. On the basis of
these observations, a small organic molecule, 4′-fluoro-<i>N</i>-phenyl-[1,1′-biphenyl]-3-carboxamide, was designed
as a generic scaffold that itself directly mimics the binding mode
of the side chains of hydrophobic projecting hot spots at positions <i>i</i>, <i>i</i> + 3, and <i>i</i> + 7 of
an α-helix. Convenient decoration of this generic scaffold led
to the selective disruption of α-helix-mediated PPIs. A series
of small-molecule inhibitors selective for β-catenin/B-cell
lymphoma 9 (BCL9) over β-catenin/cadherin PPIs was designed
and synthesized. The binding mode of new inhibitors was characterized
by site-directed mutagenesis and structure–activity relationship
studies. This new class of inhibitors can selectively disrupt β-catenin/BCL9
over β-catenin/cadherin PPIs, suppress the transactivation of
canonical Wnt signaling, downregulate the expression of Wnt target
genes, and inhibit the growth of Wnt/β-catenin-dependent cancer
cells