MEI Kodierung der frühesten Notation in linienlosen Neumen

Das Optical Neume Recognition Project (ONRP) hat die digitale Kodierung von musikalischen Notationszeichen aus dem Jahr um 1000 zum Ziel – ein ambitioniertes Vorhaben, das die Projektmitglieder veranlasste, verschiedenste methodische Ansätze zu evaluieren. Die Optical Music Recognition-Software soll eine linienlose Notation aus einem der ältesten erhaltenen Quellen mit Notationszeichen, dem Antiphonar Hartker aus der Benediktinerabtei St. Gallen (Schweiz), welches heute in zwei Bänden in der Stiftsbibliothek in St. Gallen aufbewahrt wird, erfassen. Aufgrund der handgeschriebenen, linienlosen Notation stellt dieser Gregorianische Gesang den Forscher vor viele Herausforderungen. Das Werk umfasst über 300 verschiedene Neumenzeichen und ihre Notation, die mit Hilfe der Music Encoding Initiative (MEI) erfasst und beschrieben werden sollen. Der folgende Artikel beschreibt den Prozess der Adaptierung, um die MEI auf die Notation von Neumen ohne Notenlinien anzuwenden. Beschrieben werden Eigenschaften der Neumennotation, um zu verdeutlichen, wo die Herausforderungen dieser Arbeit liegen sowie die Funktionsweise des Classifiers, einer Art digitalen Neumenwörterbuchs

Additional file 4: Table S3. of Genome-wide characterization and expression analysis of MYB transcription factors in Gossypium hirsutum

Location of MYB genes in the upland cotton genome. The positive (+) and negative (−) symbols following each gene represent forward and reverse orientations on the chromosome, respectively. (XLSX 45 kb

La Sorte : organe typographique incolore et mensuel : satirique, antilittéraire, peu artistique et quelquefois illustré...

mars 19011901/03 (A11,N112)

Additional file 5: Table S4. of Genome-wide characterization and expression analysis of MYB transcription factors in Gossypium hirsutum

Synonymous and non-synonymous substitution rates and the estimated times for the tandem and segmental duplication events in GhMYB genes. (XLSX 18 kb

Additional file 3: Figure S1. of Genome-wide characterization and expression analysis of MYB transcription factors in Gossypium hirsutum

Schematic representation of the general structure of upland cotton R1-MYB, 2R-MYB, 3R-MYB and 4R-MYB domain proteins. (TIF 400 kb

Additional file 6: Figure S2. of Genome-wide characterization and expression analysis of MYB transcription factors in Gossypium hirsutum

Phylogenetic relationship, gene structure, and gene expression pattern of MYB family in G. hirsutum (A) the phylogenetic tree of MYB proteins in upland cotton (B) the exon/intron structure of MYB genes of upland cotton. The blue boxes represent upstream/downstream, yellow boxes represent exons (CDS) and black lines indicate introns. (C) Expression patterns of MYB genes in upland cotton during different stages of cotton fiber development (−1, 1, 3, 5, and 10DPA). The RNA-seq data were analyzed by genesis_v1.7.6.30.09.10-DIGERATI software. Red color represents the MYB genes expressed at higher levels, black represents the genes expressed at lower levels and white color represents the genes that could not be detected by RNA-seq across different stages of fiber development. (TIF 64281 kb

Additional file 7: Figure S3. of Genome-wide characterization and expression analysis of MYB transcription factors in Gossypium hirsutum

The neighbor-joining (NJ) method, and minimum evolution methods of MYB family in G. hirsutum. (TIF 16793 kb

Additional file 9: Table S5. of Genome-wide characterization and expression analysis of MYB transcription factors in Gossypium hirsutum

The statistical analysis of each group of the NJ phylogenetic tree. (XLSX 13 kb

Additional file 10: Table S6. of Genome-wide characterization and expression analysis of MYB transcription factors in Gossypium hirsutum

The Ka/Ks ratios of MYB gene family in cotton (Gcpb raimodii/upland cotton). (XLSX 16 kb

Chromosomal distribution of the <i>COBL</i> family genes in <i>G</i>. <i>raimondii</i>.

<p>The chromosome numbers were consistent with the interspecific genetic map (D1 to D13) in allotetraploid cultivated cotton species [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0145725#pone.0145725.ref034" target="_blank">34</a>] and the scaffolds (Chr.1 to Chr.13) in the genomic data of <i>G</i>. <i>raimondii</i> [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0145725#pone.0145725.ref030" target="_blank">30</a>]. The nomenclature of <i>COBLs</i> was based on the order of the chromosomes in <i>G</i>. <i>raimondii</i>. Lines were drawn to connect the duplicated genes.</p