13 research outputs found
Use of Polyion Complexation for Polymerization-Induced Self-Assembly in Water under Visible Light Irradiation at 25 °C
Polyion
complexation (PIC) as the driving force of polymerization-induced
self-assembly (PISA), that is, PICâPISA, is explored. Reversible
additionâfragmentation chain transfer (RAFT) dispersion polymerization
of NH<sub>3</sub><sup>+</sup>-monomer 2-aminoethylacrylamide hydrochloride
(AEAM) can be achieved in water under visible light irradiation at
25 °C, using nonionic poly2-hydroxypropylmethacrylamide (PHPMA)
macromolecular chain transfer agent in the presence of anionic polyÂ(sodium
2-acrylamido-2-methylpropanesulfonate) (PAMPS) PIC-template. Sphere-to-network
transition occurs, owing to the PIC of PAMPS with growing chains upon
reaction close to isoelectric point (IEP); thereafter, the increase
of electrostatic repulsion promotes the split of networks and the
rupture of spheres into fragments. Therefore, the free-flowing solution
becomes viscous liquid and free-standing physical gel, and then back
into viscous and free-flowing liquid. Such a PICâPISA is appealing
for gene delivery because the size and surface charge are variable
on demand and at high solids
Chemical structure of related antibiotics (A) and genetic organization of the muraymycin gene cluster (B).
<p>Red arrows indicate the promoters which are probably the approximate binding sites of Mur34, black arrows mean the specific genes selected for quantitative real-time PCR, and the dotted lines show the gene intergenic regions analyzed by EMSA.</p
Synthesis of One-Component Nanostructured Polyion Complexes via Polymerization-Induced Electrostatic Self-Assembly
Nanostructured
polyion complexes (PICs) are expected to serve as
novel platforms to stabilize and deliver drugs, proteins, and nucleic
acids. Yet, traditional self-assembly suffers from lack of scale-up
and reproducibility. Particularly for one-component PICs, only spheres
are available to date. Here, we report an efficient and scalable strategy
to prepare one-component low-dimensional PICs. It involves visible-light-mediated
RAFT iterative polymerization of opposite-charge monomers at 25% w/w
solids in water at 25 °C. Sphere-film-vesicle transition and
charge-/medium-tunable shape selectivity are reported. One-component
PIC nanowire, ultrathin film, vesicle, tube, and surface-charged vesicle
are easily prepared, and vesicle-polymerization is fulfilled, using
this new strategy. This strategy provides a general platform to prepare
one-component low-dimensional PICs with tailorable morphologies and
high reproducibility on commercially viable scale under eco-friendly
conditions
Analysis of the Mur34 binding site by DNase I footprinting assay.
<p>(A) Analysis of antisense strand Îł-<sup>32</sup>P labeled DNA (left) and the sense strand Îł-<sup>32</sup>P labeled DNA (right) upstream of <i>mur33</i>. Lanes G (1), A (2), T (3) and C (4) are sequencing ladder. Samples from lands 5â10 contain the same amount of the binding DNA with an increasing amount (0â3.2 ”g ”l<sup>-1</sup>) of purified His<sub>6</sub>Mur34. The complexes from the samples were digested by DNase I (0.004U per10 ”l) at 30°C for 1 min. The vertical sequences to the right of each gel picture indicate the DNA regions protected from the cleavage of DNase I. The transcription start point (TSP) was shown for each DNA strand. (B) âGâ indicates the TSP. The sequences underlined were the protected regions by His<sub>6</sub>Mur34 under DNase I, âCACâ indicates the translation initiation codon (TIC), the bold regions upstream of TSP are -10 âTGATATâ and -35 âGTAAAACAGâ regions. The bases in the boxes found are palindromes, and the bold and underlined bases near the TIC are supposed to be the Shine-Dalgarno consensus.</p
Gene expression analysis of the <i>mur</i> genes.
<p>(A) Transcription analysis of intergenic region of the selected <i>mur</i> genes. Top, ethidium bromide-stained agarose gels showing RT-PCR fragments from intergenic regions. <i>mur10</i>â<i>mur11</i> means that the detected region between <i>mur10</i> and <i>mur11</i>, and the arrows showed the possible orientation of transcription. In each gel, the left band was positive control using genomic DNA as template, the middle band showed the PCR sample using cDNA as template, the right band is negative control using template from total RNA sample digested with DNase I. (B) Time course of the transcription difference of <i>mur11</i> and <i>mur27</i> for DM-5 and the wild type strain. (C). The transcription difference of DM-5 and the wild type strain for 96 h incubation was used for the comparative analysis.</p
Analysis of <i>mur33</i> promoter by catechol dioxygenase activity assay.
<p>(A) The enzyme activities for the seed cultures of WT/pJTU5034, WT/pJTU5037 and WT/pJTU5038. (B) The enzyme activities for the seed cultures of DM-5/pJTU5034, DM-5/pJTU5037 and DM-5/pJTU5038. (C) The enzyme activities for the seed cultures of WT/pJTU5034 and DM-5/pJTU5034. (D) The enzyme activities for the fermentation cultures of WT/pJTU5034 and DM-5/pJTU5034. All histograms showed the quantitative catechol dioxygenase activity of <i>Streptomyces</i> sp. NRRL30471 and DM-5 independently containing pJTU5034, pJTU5037, pJTU5038 and pJTU3700. WT/pJTU3700 indicates <i>Streptomyces</i> sp. NRRL 30471 containing pJTU3700 (no <i>mur33</i> promoter) is as the negative control. WT/pJTU5034, indicates <i>Streptomyces</i> sp. NRRL 30471 containing pJTU5034 (natural <i>mur33</i> promoter). WT/pJTU5037 indicates <i>Streptomyces</i> sp. NRRL 30471 containing pJTU5037 (the -10 region mutated on <i>mur33</i> promoter). WT/pJTU5038 indicates <i>Streptomyces</i> sp. NRRL 30471 containing pJTU5038 (the -35 region mutated on <i>mur33</i> promoter). Likewise, DM-5 derived strains were designated.</p
EMSA analysis of His<sub>6</sub>Mur34.
<p>(A) SDS-PAGE analysis of His<sub>6</sub>Mur34, the theoretical molecular mass of His<sub>6</sub>Mur34 is 19.6 kDa. The Mur34 protein was loaded into 12% SDS-PAGE for analysis. (B) EMSA analysis of Mur34 and <i>mur33</i> promoter. For the above figure, 50-fold of poly dI-dC was added to the each reaction system with an increasing amount of Mur34. For the competitive assay (below), lower case of all samples contain 2.6Ă10<sup>â4</sup> M promoter DNA of <i>mur33</i> (90-bp specific DNA), for samples 2, 3 and 4, extra 9Ă10<sup>â6</sup> M His<sub>6</sub>Mur34 was individually contained. Moreover, 50-fold of unlabelled competitive DNA was added to the reaction system (band 3), and 50-fold of unspecific non-competitive DNA to the system (band 4). Band designations, 1, free DNA; 2-4, protein-DNA complexes.</p
Mutational analysis of <i>mur34</i>.
<p>(A) Schematic representation for the construction of DM-5 mutant, as a 0.23-kb of <i>mur34</i> was replaced by the 1.43-kb <i>neo</i> cassette, the DM-5 mutant gives a 1.74-kb PCR product, while the wild type strain is 0.5-kb. (B) Bioassay and LC-MS analysis of the metabolites. Top, the metabolites produced by wild type strain. Bottom, the metabolites produced by DM-5 mutant. Muraymycin C1 and D1 components were selected for LC-MS comparative analysis.</p
Compartmentalization and Unidirectional Cross-Domain Molecule Shuttling of Organometallic Single-Chain Nanoparticles
Compartmentalization and unidirectional
cross-domain molecule shuttling
are omnipresent in proteins, and play key roles in molecular recognition,
enzymatic reaction, and other living functions. Nanomachinery design
emulating these biological functions is being considered as one of
the most ambitious and challenging tasks in modern chemistry and nanoscience.
Here, we present a biomimetic nanomachinery design using single-chain
technology. Stepwise complex of the outer blocks of water-soluble
linear ABC triblock terpolymer to copper ions yields dumbbell-shaped
single-chain nanoparticle. A novel nanomachine capable of compartmentalization
and unidirectional cross-domain molecule shuttling has been achieved
upon ascorbic acid reduction, leading to synergistically donating/accepting
copper centers between discrete double heads, overall dumbbell-to-tadpole
configurational transition, and intake of oxidized ascorbic acid into
reconstructed head. Subsequent air oxidation results in the inverse
molecule shuttling and configurational transition processes. This
is the first demonstration of biomimetic nanomachinery design that
is capable of compartmentalization and unidirectional cross-domain
molecule shuttling, exemplified simply using a new single-chain technology