7 research outputs found

    Sliding window plot of the nucleotide diversity per site (π) comparing the level of genetic diversity among the domain I sequences of the parasite from all five study areas

    No full text
    <p><b>Copyright information:</b></p><p>Taken from "Sequence diversity and natural selection at domain I of the apical membrane antigen 1 among Indian populations"</p><p>http://www.malariajournal.com/content/6/1/154</p><p>Malaria Journal 2007;6():154-154.</p><p>Published online 22 Nov 2007</p><p>PMCID:PMC2211494.</p><p></p> The π values were calculated on DnaSP with window length 100 bp and step size of 25 bp. In all study areas, the maximum diversity was seen between the nucleotide positions 50 and 200 bps. n; number of isolates

    The linkage disequilibrium (LD) plot showing non-random association between nucleotide variants at different polymorphic sites

    No full text
    <p><b>Copyright information:</b></p><p>Taken from "Sequence diversity and natural selection at domain I of the apical membrane antigen 1 among Indian populations"</p><p>http://www.malariajournal.com/content/6/1/154</p><p>Malaria Journal 2007;6():154-154.</p><p>Published online 22 Nov 2007</p><p>PMCID:PMC2211494.</p><p></p> The Rvalues are plotted against the nucleotide distances with two-tailed Fisher's exact test of significance using DnaSP. The value of LD index (range from -1 to +1) declines with increasing nucleotide distance, indicating that recombination events are taking place. The analysis was performed considering all polymorphic sites. () Assam, () Orissa, () A & N, () Goa, () UP, and () Total
    corecore