Human impacts on soil carbon dynamics of deep-rooted Amazonian forests and effect of land use change on the carbon cycle in Amazon soils

The main objective of these NASA-funded projects is to improve our understanding of land-use impacts on soil carbon dynamics in the Amazon Basin. Soil contains approximately one half of tropical forest carbon stocks, yet the fate of this carbon following forest impoverishment is poorly studied. Our mechanistics approach draws on numerous techniques for measuring soil carbon outputs, inputs, and turnover time in the soils of adjacent forest and pasture ecosystems at our research site in Paragominas, state of Para, Brazil. We are scaling up from this site-specific work by analyzing Basin-wide patterns in rooting depth and rainfall seasonality, the two factors that we believe should explain much of the variation in tropical soil carbons dynamics. In this report, we summarize ongoing measurements at our Paragominas study site, progress in employing new field data to understand soil C dynamics, and some surprising results from our regional, scale-up work

Bomb-test 90Sr in Pacific and Indian Ocean surface water as recorded by banded corals

We report here measurements of bomb-test 90Sr activity in the CaCO3 skeletons of banded head forming corals collected from nine locations in the tropical Pacific and Indian Oceans. Density variations in skeletal carbonate demarcate annual growth bands and allow one to section individual years. Measurements of 90Sr activity in the annual bands reconstruct the activity of the water in which the coral grew. Our oldest records date to the early years of the nuclear era and record not only fallout deposition from the major U.S. and Soviet tests of 1958-1962, but also the huge, and largely unappreciated, localized inputs from the U.S. tests at Eniwetok and Bikini atolls during 1952-1958. In the 1960's the 90Sr activity in Indian Ocean surface water was twice as high as activity levels in the South Pacific at comparable latitudes. We suggest that substantial amounts of northern hemisphere fallout moved west and south into the Indian Ocean via passages through the Indonesian archipelago. Equatorial Pacific 90Sr levels have remained relatively constant from the mid 1960's through the end of the 1970's in spite of 90Sr decay, reflecting a large-scale transfer of water between the temperate and tropical North Pacific. Activity levels at Fanning Is. (4°N, 160°W) appear to vary in conjunction with the 3-4 year El Niño cycle. © 1985 Elsevier Science Publishers B.V

Effect of land use change on the carbon cycle in Amazon soils

The overall goal of this study was to provide a quantitative understanding of the cycling of carbon in the soils associated with deep-rooting Amazon forests. In particular, we wished to apply the understanding gained by answering two questions: (1) what changes will accompany the major land use change in this region, the conversion of forest to pasture? and (2) what is the role of carbon stored deeper than one meter in depth in these soils? To construct carbon budgets for pasture and forest soils we combined the following: measurements of carbon stocks in above-ground vegetation, root biomass, detritus, and soil organic matter; rates of carbon inputs to soil and detrital layers using litterfall collection and sequential coring to estimate fine root turnover; C-14 analyses of fractionated SOM and soil CO2 to estimate residence times; C-13 analyses to estimate C inputs to pasture soils from C-4 grasses; soil pCO2, volumetric water content, and radon gradients to estimate CO2 production as a function of soil depth; soil respiration to estimate total C outputs; and a model of soil C dynamics that defines SOM fractions cycling on annual, decadal, and millennial time scales

A special issue preface: Radiocarbon in the Anthropocene.

The Anthropocene is defined by marked acceleration in human-induced perturbations to the Earth system. Anthropogenic emissions of CO2 and other greenhouse gases to the atmosphere and attendant changes to the global carbon cycle are among the most profound and pervasive of these perturbations. Determining the magnitude, nature and pace of these carbon cycle changes is crucial for understanding the future climate that ecosystems and humanity will experience and need to respond to. This special issue illustrates the value of radiocarbon as a tool to shed important light on the nature, magnitude and pace of carbon cycle change. This article is part of the Theo Murphy meeting issue Radiocarbon in the Anthropocene

Community Composition and Abundance of Bacterial, Archaeal and Nitrifying Populations in Savanna Soils on Contrasting Bedrock Material in Kruger National Park, South Africa

Savannas cover at least 13% of the global terrestrial surface and are often nutrient limited, especially by nitrogen. To gain a better understanding of their microbial diversity and the microbial nitrogen cycling in savanna soils, soil samples were collected along a granitic and a basaltic catena in Kruger National Park (South Africa) to characterize their bacterial and archaeal composition and the genetic potential for nitrification. Although the basaltic soils were on average 5 times more nutrient rich than the granitic soils, all investigated savanna soil samples showed typically low nutrient availabilities, i.e., up to 38 times lower soil N or C contents than temperate grasslands. Illumina MiSeq amplicon sequencing revealed a unique soil bacterial community dominated by Actinobacteria (20–66%), Chloroflexi (9–29%), and Firmicutes (7–42%) and an increase in the relative abundance of Actinobacteria with increasing soil nutrient content. The archaeal community reached up to 14% of the total soil microbial community and was dominated by the thaumarchaeal Soil Crenarchaeotic Group (43–99.8%), with a high fraction of sequences related to the ammonia-oxidizing genus Nitrosopshaera sp. Quantitative PCR targeting amoA genes encoding the alpha subunit of ammonia monooxygenase also revealed a high genetic potential for ammonia oxidation dominated by archaea (~5 × 107 archaeal amoA gene copies g−1 soil vs. mostly < 7 × 104 bacterial amoA gene copies g−1 soil). Abundances of archaeal 16S rRNA and amoA genes were positively correlated with soil nitrate, N and C contents. Nitrospira sp. was detected as the most abundant group of nitrite oxidizing bacteria. The specific geochemical conditions and particle transport dynamics at the granitic catena were found to affect soil microbial communities through clay and nutrient relocation along the hill slope, causing a shift to different, less diverse bacterial and archaeal communities at the footslope. Overall, our results suggest a strong effect of the savanna soils' nutrient scarcity on all microbial communities, resulting in a distinct community structure that differs markedly from nutrient-rich, temperate grasslands, along with a high relevance of archaeal ammonia oxidation in savanna soils

Probability Distributions of Radiocarbon in Open Linear Compartmental Systems at Steady-State

Radiocarbon (C-14) is commonly used as a tracer of the carbon cycle to determine how fast carbon moves between different reservoirs such as plants, soils, rivers, or oceans. However such studies mostly emphasize the mean value (as Delta C-14) of an unknown probability distribution. We introduce a novel algorithm to compute Delta C-14 distributions from knowledge of the age distribution of carbon in linear compartmental systems at steady-state. Our results demonstrate that the shape of the distributions might differ according to the speed of cycling of ecosystem compartments and their connectivity within the system, and might contain multiple peaks and long tails. The distributions are also sensitive to the variations of Delta C-14 in the atmosphere over time, as influenced by the counteracting anthropogenic effects of fossil-fuel emissions (C-14-free) and nuclear weapons testing (excess C-14). Lastly, we discuss insights that such distributions can offer for sampling and design of experiments aiming to capture the precise variance of Delta C-14 values present in the multi-compartmental ecosystems

Shifts in soil microbial community structure, nitrogen cycling and the concomitant declining N availability in ageing primary boreal forest ecosystems

AbstractPlant growth in boreal forests is commonly limited by a low supply of nitrogen, a condition that may be aggravated by high tree below-ground allocation of carbon to ectomycorrhizal (ECM) fungi and associated microorganisms. These in turn immobilise N and reduce its availability to plants as boreal ecosystems develop. Here, we studied a boreal forest ecosystem chronosequence created by new land rising out of the sea due to iso-static rebound along the coast of northern Sweden. We used height over the ocean to estimate ecosystem age and examined its relationship to soil microbial community structure and the gross turnover of N. The youngest soils develop with meadows by the coast, followed by a zone of N2-fixing alder trees, and primary boreal conifer forest on ground up to 560 years old. The young soils in meadows contained little organic matter and microbial biomass per unit area. Nitrogen was turned over at low rates when expressed per area (m−2), but specific rates (per gram soil carbon (C)) were the highest found along the transect. In the zone with alder, the amounts of soil C and microbial biomass were much higher (bacterial biomass had doubled and fungal biomass quadrupled). Rates of gross N mineralisation (expressed on an area basis) were highest, but the retention of added labelled NH4+ was lowest in this soil as compared to other ages. The alder zone also had the largest extractable pools of inorganic N in soil and highest N % in plant foliage. In the older conifer forest ecosystems the amounts of soil C and N, as well as biomass of both bacteria and fungi increased. Data on organic matter 14C suggested that the largest input of recently fixed plant C occurred in the younger coniferous forest ecosystems. With increasing ecosystem age, the ratio of microbial C to total soil C was constant, whereas the ratio of microbial N to total soil N increased and gross N mineralization declined. Simultaneously, plant foliar N % decreased and the natural abundance of 15N in the soil increased. More specifically, the difference in δ15N between plant foliage and soil increased, which is related to relatively greater retention of 15N relative to 14N by ECM fungi as N is taken up from the soil and some N is transferred to the plant host. In the conifer forest, where these changes were greatest, we found increased fungal biomass in the F- and H-horizons of the mor-layer, in which ECM fungi are known to dominate (the uppermost horizon with litter and moss is dominated by saprotrophic fungi). Hence, we propose that the decreasing availability of N to the plants and the subsequent decline in plant production in ageing boreal forests is linked to high tree belowground C allocation to ECM fungi, a strong microbial sink for available soil N