Dryad Greenbulls - Vangestel Carl

Microsatellite data (10 loci) of 362 birds (Phyllastrephus cabanisi) sampled in the Taita Hills, Kenya during 2 periods (first period (1996-2000), second period (2006-2010))

Multiple distance class plots illustrating the gradual decay of positive genetic structure with increasing geographical distance.

<p>Plots are shown for each sex at various spatio-temporal scales: at a regional scale for period 1 (a), period 2 (b) and both sexes lumped (c); at a local scale (within Mbololo) for period 2 (d). Error bars indicate 95% CI as determined by 9999 bootstraps.</p

Levels of admixture provided by Bayesian clustering analyses (STRUCTURE) for each period separately (left panel: period 1/right panel: period 2).

<p>Following the procedure outlined in [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0071624#B56" target="_blank">56</a>], optimal cluster sizes of K=2 and K=4 were assigned to period 1 and period 2, respectively.</p

Map of the study area with the location of three large (MB, CH, NG) and two small (FU, ND) indigenous forest fragments that hold breeding populations of cabanis’s greenbul (<i>Phyllastrephus</i><i>cabanisi</i>).

<p>Analyses were performed along linear transects at two different geographical scales: a local (within-fragment) scale in fragment MB (A), and a landscape (among-fragment) scale including fragments CH, NG, FU and ND (B).</p

Distribution of maximum post-fledging recapture distances of <i>P</i><i>. cabanisi</i> fledglings during their first year and over multiple years.

<p>Data were collected between 2007–2012, sample sizes are indicated above each vertical bar.</p

Distribution of randomized statistics under the null hypothesis of equal dispersal rates in both sexes.

<p>Permuted test statistics are ‘male mAI_c-female mAIc’ (left) and ‘vAI_c female/vAI_c male’ (right). Observed statistics are indicated by vertical dashed line and extreme positive values indicate female-biased dispersal. Upper panel: regional - period 1; middle panel: regional - period 2; lower panel: local - period 2.</p

Dryad Data Vangestel et al

Dryad Data Vangestel et a

PG_genepop9loc

This genepop file contains the genetic data (9 microsatellites) used in most genetic analyses: Effective sizes, STRUCTURE, DiyABC, Bottleneck, BIMr (adults). The file is divided by forest fragments (MB:Mbololo,NG:Ngangao,FU:Fururu,ND:Ndiwenyi,CH:Chawia) and period (1 and 2)

Phyllastrephus_cabanisi_microsatellites

Microsatellites data: 10 loci; RING = individual ID; FRAG: Forest fragment; PERIOD: 1 (1996-2000) and 2 (2006-2010); followed by 10 loci (one column per allele): Ase18, Indigo41, Ls1, Ls2, Mcyu4, Pca3, Pca4, Pfi04, Pfl54, WBSW2

CMR_data

This folder contains all minimally necessary information to run the Jolly-Seber models with program MARK (White, Gary C., and Kenneth P. Burnham. Program MARK: survival estimation from populations of marked animals. Bird study 46.S1 (1999): S120-S139) as mentioned in the main paper. There are 10 input files for program MARK, two for each of the five fragments (MB:Mbololo,NG:Ngangao,FU:Fururu,ND:Ndiwenyi,CH:Chawia) that represent periods 1 & 2 respectively. Additionally, another 10 auxiliary datasets are provided to adjust for unequal interval lengths between sampling occasions within each fragment (see program MARK documentation). Each input data file is a tab-separated text file (.txt) in which the first column represents an encounter history of an individual, for a given fragment and time period (columns 2 and 3). Each auxiliary data file is a tab-separated text file (.txt) with interval id, starting date of interval, interval length (in days) and interval length (in fraction of a year)