6 research outputs found
Control isolates used during development of <i>Ct</i>GEM typing.
<p>Control isolates used during development of <i>Ct</i>GEM typing.</p
HRMA analysis of the <i>ompA</i> fragment (ofr).
<p>(A) Sequence alignment of the known haplotypes of ofr showing the primer sequences (grey shading). (B) HRMA curves showing the resolution of the genotypes. A detailed guide for the HRMA is given in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0195454#pone.0195454.s002" target="_blank">S2 File</a> in the supplemental material.</p
Numbers and percentages of successful PCR amplifications from 113 <i>C</i>. <i>trachomatis</i> positive clinical specimens.
<p>Numbers and percentages of successful PCR amplifications from 113 <i>C</i>. <i>trachomatis</i> positive clinical specimens.</p
Descriptions of the <i>Ct</i>GEM types, and the numbers and frequencies of the types in sets of genomes/clinical specimens.
<p>Descriptions of the <i>Ct</i>GEM types, and the numbers and frequencies of the types in sets of genomes/clinical specimens.</p
Relationship between rg1 and HRMA alleles alone and in combination, and <i>C</i>. <i>trachomatis</i> phylogeny.
<p>The phylogenetic tree is based on genome-wide orthologous SNPs and adapted from Andersson et al (2). HRMA alleles and <i>Ct</i>GEM types are indicated with colours.</p