2 research outputs found
Dominant Carbons in <i>trans</i>- and <i>cis</i>-Resveratrol Isomerization
A comprehensive
analysis for isomerization of geometric isomers
in the case of resveratrol (R) has been presented. As an important
red wine molecule, only one geometric isomer of resveratrol, i.e., <i>trans</i>-R rather than <i>cis</i>-R, is primarily
associated with health benefit. In the present study, density function
theory (DFT) provides accurate descriptions of isomerization of resveratrol.
The nearly planar <i>trans</i>-R forms a relatively rigid
and less flexible conjugate network, but the nonplanar <i>cis</i>-R favors a more flexible structure with steric through space interaction.
The calculated carbon nuclear magnetic resonance (NMR) chemical shift
indicates that all carbons are different in the isomers; it further
reveals that four carbon sites, i.e., C<sub>(6)</sub>, C<sub>(8)</sub>ī»C<sub>(9)</sub>, and C<sub>(11)</sub>, have a significant
response to the geometric isomerization. Here C<sub>(6)</sub> is related
to the steric effect in <i>cis</i>-R, whereas C<sub>(11)</sub> may indicate the isomerization proton transfer on C<sub>(9)</sub> linking with the resorcinol ring. The excess orbital energy spectrum
(EOES) confirms the NMR ābridge of interestā carbons
and reveals that five valence orbitals of 34<i>a</i>, 35<i>a</i>, 46<i>a</i>, 55<i>a</i>, and 60<i>a</i> respond to the isomerization most significantly. The highest
occupied molecular orbital (HOMO), 60<i>a</i>, of the isomer
pair is further studied using dual space analysis (DSA) for its orbital
momentum distributions, which exhibit p-electron dominance for <i>trans</i>-R but hybridized sp-electron dominance for <i>cis</i>-R. Finally, energy decomposition analysis (EDA) highlights
that <i>trans</i>-R is preferred over <i>cis</i>-R by ā4.35 kcalĀ·mol<sup>ā1</sup>, due to small
electrostatic energy enhancement of the attractive orbital energy
with respect to the Pauli repulsive energy
Resveratrolās Hidden Hand: A Route to the Optical Detection of Biomolecular Binding
Resveratrol is a
stilbenoid phytoalexin with promising myriad health
benefits predominantly contributed by the <i>trans</i> (<i>E</i>) diastereomeric form. A recent study has implicated the <i>cis</i> (<i>Z</i>) diastereomer in human health. This
stereoisomer binds with high affinity to human tyrosyl-tRNA synthetase,
initiating a downstream cascade that promotes the expression of genes
associated with the cellular stress response. We discovered that the
nonplanar structure of the <i>cis</i>-resveratrol conformer
possesses certain chiral signals in its simulated vibrational circular
dichroism (VCD) and Raman optical activity (ROA) spectra. These features
may be used for the optical detection of the binding event and in
understanding the more diversified biological roles of <i>trans</i>-resveratrol over <i>cis</i>-resveratrol. We use a density
functional theory model, which is validated against the known results
for the <i>E</i> diastereomer. The <i>Z</i> diastereomer
is significantly nonplanar and can exist in two helical atropisomeric
forms. These forms exchange rapidly in solution, but only one is observed
to bind with the synthetase. This suggests that the binding may generate
an enantiomeric excess, leading to detectable changes in the vibrational
optical activity spectra. We identify candidate features at 998, 1649,
and 1677 cm<sup>ā1</sup> in the ROA and at 1642 and 3834 cm<sup>ā1</sup> in the VCD spectra of <i>Z</i>-resveratrol
that may be useful for this purpose