3 research outputs found
Multisurface Multimode Molecular Dynamical Simulation of Naphthalene and Anthracene Radical Cations by Using Nearly Linear Scalable Time-Dependent Discrete Variable Representation Method
The major portion of the algorithm
of the time-dependent discrete
variable representation (TDDVR) method is recently parallelized using
the shared-memory parallelization scheme with the aim of performing
dynamics on relatively large molecular systems. Because of the astronomical
importance of naphthalene and anthracene, we have investigated their
radical cations as models for theoretical simulation of complex photoelectron
spectra and nonradiative decay process using the newly implemented
parallel TDDVR code. The strong vibronic coupling among the six lowest
doublet electronic states makes these polynuclear hydrocarbons dynamically
important. The aim of the present investigation is to show the efficiency
of our current TDDVR algorithm to perform dynamics on large dimensional
quantum systems in vibronically coupled electronic manifold. Both
the sequential and the parallelized TDDVR algorithms are almost linear
scalable for an increase in number of processors. Because a significant
speed-up is achieved by cycling in the correct way over arrays, all
of the simulations are performed within a reasonable wall clock time.
Our theoretical spectra well reproduce the features of the corresponding
experimental analog. The dynamical outcomes, for example, population,
photoelectron spectra, and diffused interstellar bands, etc., of our
quantum-classical approach show good agreement with the findings of
the well-established quantum dynamical method, that is, multi configuration
time-dependent Hartree (MCTDH) approach
ADT: A Generalized Algorithm and Program for Beyond Born–Oppenheimer Equations of “<i>N</i>” Dimensional Sub-Hilbert Space
The
major bottleneck of first principle based beyond Born–Oppenheimer
(BBO) treatment originates from large number and complicated expressions
of adiabatic to diabatic transformation (ADT) equations for higher
dimensional sub-Hilbert spaces. In order to overcome such shortcoming,
we develop a generalized algorithm, “ADT” to generate
the nonadiabatic equations through symbolic manipulation and to construct
highly accurate diabatic surfaces for molecular processes involving
excited electronic states. It is noteworthy to mention that the nonadiabatic
coupling terms (NACTs) often become singular (removable) at degenerate
point(s) or along a seam in the nuclear configuration space (CS) and
thereby, a unitary transformation is required to convert the kinetically
coupled (adiabatic) Hamiltonian to a potentially (diabatic) one to
avoid such singularity(ies). The “ADT” program can be
efficiently used to (a) formulate analytic functional forms of differential
equations for ADT angles and diabatic potential energy matrix and
(b) solve the set of coupled differential equations numerically to
evaluate ADT angles, residue due to singularity(ies), ADT matrices,
and finally, diabatic potential energy surfaces (PESs). For the numerical
case, user can directly provide ab initio data (adiabatic
PESs and NACTs) as input files to this software or can generate those
input files through in-built python codes interfacing MOLPRO followed
by ADT calculation. In order to establish the workability of our program
package, we selectively choose six realistic molecular species, namely,
NO2 radical, H3+, F + H2, NO3 radical, C6H6+ radical
cation, and 1,3,5-C6H3F3+ radical cation, where two, three, five and six electronic states
exhibit profound nonadiabatic interactions and are employed to compute
diabatic PESs by using ab initio calculated adiabatic
PESs and NACTs. The “ADT” package released under the
GNU General Public License v3.0 (GPLv3) is available at https://github.com/AdhikariLAB/ADT-Program and also as the Supporting Information of this article
ADT: A Generalized Algorithm and Program for Beyond Born–Oppenheimer Equations of “<i>N</i>” Dimensional Sub-Hilbert Space
The
major bottleneck of first principle based beyond Born–Oppenheimer
(BBO) treatment originates from large number and complicated expressions
of adiabatic to diabatic transformation (ADT) equations for higher
dimensional sub-Hilbert spaces. In order to overcome such shortcoming,
we develop a generalized algorithm, “ADT” to generate
the nonadiabatic equations through symbolic manipulation and to construct
highly accurate diabatic surfaces for molecular processes involving
excited electronic states. It is noteworthy to mention that the nonadiabatic
coupling terms (NACTs) often become singular (removable) at degenerate
point(s) or along a seam in the nuclear configuration space (CS) and
thereby, a unitary transformation is required to convert the kinetically
coupled (adiabatic) Hamiltonian to a potentially (diabatic) one to
avoid such singularity(ies). The “ADT” program can be
efficiently used to (a) formulate analytic functional forms of differential
equations for ADT angles and diabatic potential energy matrix and
(b) solve the set of coupled differential equations numerically to
evaluate ADT angles, residue due to singularity(ies), ADT matrices,
and finally, diabatic potential energy surfaces (PESs). For the numerical
case, user can directly provide ab initio data (adiabatic
PESs and NACTs) as input files to this software or can generate those
input files through in-built python codes interfacing MOLPRO followed
by ADT calculation. In order to establish the workability of our program
package, we selectively choose six realistic molecular species, namely,
NO2 radical, H3+, F + H2, NO3 radical, C6H6+ radical
cation, and 1,3,5-C6H3F3+ radical cation, where two, three, five and six electronic states
exhibit profound nonadiabatic interactions and are employed to compute
diabatic PESs by using ab initio calculated adiabatic
PESs and NACTs. The “ADT” package released under the
GNU General Public License v3.0 (GPLv3) is available at https://github.com/AdhikariLAB/ADT-Program and also as the Supporting Information of this article
