139 research outputs found
Pathways to faceting of vesicles
The interplay between geometry, topology and order can lead to geometric
frustration that profoundly affects the shape and structure of a curved
surface. In this commentary we show how frustration in this context can result
in the faceting of elastic vesicles. We show that, under the right conditions,
an assortment of regular and irregular polyhedral structures may be the low
energy states of elastic membranes with spherical topology. In particular, we
show how topological defects, necessarily present in any crystalline lattice
confined to spherical topology, naturally lead to the formation of icosahedra
in a homogeneous elastic vesicle. Furthermore, we show that introducing
heterogeneities in the elastic properties, or allowing for non-linear bending
response of a homogeneous system, opens non-trivial pathways to the formation
of faceted, yet non-icosahedral, structures
Spectral analysis for the iron-based superconductors: Anisotropic spin fluctuations and fully gapped s^{\pm}-wave superconductivity
Spin fluctuations are considered to be one of the candidates that drive a
sign-reversed s^{\pm} superconducting state in the iron pnictides. In the
magnetic scenario, whether the spin fluctuation spectrum exhibits certain
unique fine structures is an interesting aspect for theoretical study in order
to understand experimental observations. We investigate the detailed momentum
dependence of the short-range spin fluctuations using a 2-orbital model in the
self-consistent fluctuation exchange approximation and find that a common
feature of those fluctuations that are capable of inducing a fully gapped
s^{\pm} state is the momentum anisotropy with lengthened span along the
direction transverse to the antiferromagnetic momentum transfer. Performing a
qualitative analysis based on the orbital character and the deviation from
perfect nesting of the electronic structure for the 2-orbital and a more
complete 5-orbital model, we gain the insight that this type of anisotropic
spin fluctuations favor superconductivity due to their enhancement of
intra-orbital, but inter-band, pair scattering processes. The momentum
anisotropy leads to elliptically shaped magnetic responses which have been
observed in inelastic neutron scattering measurements. Meanwhile, our detailed
study on the magnetic and the electronic spectrum shows that the dispersion of
the magnetic resonance mode in the nearly isotropic s^{\pm} superconducting
state exhibits anisotropic propagating behavior in an upward pattern and the
coupling of the resonance mode to fermions leads to a dip feature in the
spectral function.Comment: 9 pages, 8 figure
Effects of scars on crystalline shell stability under external pressure
We study how the stability of spherical crystalline shells under external
pressure is influenced by the defect structure. In particular, we compare
stability for shells with a minimal set of topologically-required defects to
shells with extended defect arrays (grain boundary "scars" with non-vanishing
net disclination charge). We perform Monte Carlo simulations to compare how
shells with and without scars deform quasi-statically under external
hydrostatic pressure. We find that the critical pressure at which shells
collapse is lowered for scarred configurations that break icosahedral symmetry
and raised for scars that preserve icosahedral symmetry. The particular shapes
which arise from breaking of an initial icosahedrally-symmetric shell depend on
the F\"oppl-von K\'arm\'an number.Comment: 8 pages, 6 figure
Nonlinear elastic model for faceting of vesicles with soft grain boundaries
We use an elastic model to explore faceting of solid-wall vesicles with
elastic heterogeneities. We show that faceting occurs in regions where the
vesicle wall is softer, such as areas of reduced wall thicknesses or
concentrated in crystalline defects. The elastic heterogeneities are modeled as
a second component with reduced elastic parameters. Using simulated annealing
Monte Carlo simulations we obtain the vesicle shape by optimizing the
distributions of facets and boundaries. Our model allows us to reduce the
effects of the residual stress generated by crystalline defects, and reveals a
robust faceting mechanism into polyhedra other than the icosahedron.Comment: 4.5 pages, 4 figure
Quantum phase transitions of the diluted O(3) rotor model
We study the phase diagram and the quantum phase transitions of a
site-diluted two-dimensional O(3) quantum rotor model by means of large-scale
Monte-Carlo simulations. This system has two quantum phase transitions, a
generic one for small dilutions, and a percolation transition across the
lattice percolation threshold. We determine the critical behavior for both
transitions and for the multicritical point that separates them. In contrast to
the exotic scaling scenarios found in other random quantum systems, all these
transitions are characterized by finite-disorder fixed points with power-law
scaling. We relate our findings to a recent classification of phase transitions
with quenched disorder according to the rare region dimensionality, and we
discuss experiments in disordered quantum magnets.Comment: 11 pages, 14 eps figures, final version as publishe
Stratification relieves constraints from steric hindrance in the generation of compact acto-myosin asters at the membrane cortex
Recent in-vivo studies have revealed that several membrane proteins are driven to form nanoclusters by active contractile flows arising from F-actin and myosin at the cortex. The mechanism of clustering was shown to be arising from the dynamic patterning of transient contractile platforms (asters) generated by actin and myosin. Myosin-II, which assemble as minifilaments consisting of tens of myosin heads, are rather bulky structures and hence a concern could be that steric considerations might obstruct the emergence of nanoclustering. Here, using coarse-grained, agent-based simulations that respect the size of constituents, we find that in the presence of steric hindrance, the patterns exhibited by actomyosin in two dimensions, do not resemble the steady state patterns observed in our in-vitro reconstitution of actomyosin on a supported bilayer. We then perform simulations in a thin rectangular slab, allowing the separation of a layer of actin filaments from those of myosin-II minifilaments. This recapitulates the observed features of in-vitro patterning. Using super resolution microscopy, we find direct evidence for stratification in our in-vitro system. Our study suggests the possibility that molecular stratification may be an important organising feature of the cortical cytoskeleton in-vivo
Shapes of pored membranes
We study the shapes of pored membranes within the framework of the Helfrich
theory under the constraints of fixed area and pore size. We show that the mean
curvature term leads to a budding- like structure, while the Gaussian curvature
term tends to flatten the membrane near the pore; this is corroborated by
simulation. We propose a scheme to deduce the ratio of the Gaussian rigidity to
the bending rigidity simply by observing the shape of the pored membrane. This
ratio is usually difficult to measure experimentally. In addition, we briefly
discuss the stability of a pore by relaxing the constraint of a fixed pore size
and adding the line tension. Finally, the flattening effect due to the Gaussian
curvature as found in studying pored membranes is extended to two-component
membranes. We find that sufficiently high contrast between the components'
Gaussian rigidities leads to budding which is distinct from that due to the
line tension.Comment: 8 pages, 9 figure
Exotic vs. conventional scaling and universality in a disordered bilayer quantum Heisenberg antiferromagnet
We present large-scale Monte-Carlo simulations of a two-dimensional (2d)
bilayer quantum Heisenberg antiferromagnet with random dimer dilution. In
contrast to the exotic scaling scenarios found in many other random quantum
systems, the quantum phase transition in this system is characterized by a
finite-disorder fixed point with power-law scaling. After accounting for strong
corrections to scaling, characterized by a leading irrelevant exponent of
\omega = 0.48, we find universal, i.e., disorder-independent, critical
exponents z=1.310(6) and \nu=1.16(3). We discuss the consequences of these
findings and suggest new experiments.Comment: 4 pages, 5eps figures included, final version as publishe
Dynamically generated patterns in dense suspensions of active filaments
We use Langevin dynamics simulations to study dynamical behaviour of a dense
planar layer of active semi-flexible filaments. Using the strength of active
force and the thermal persistence length as parameters, we map a detailed phase
diagram and identify several non-equilibrium phases in this system. In addition
to a slowly flowing melt phase, we observe that for sufficiently high activity,
collective flow accompanied by signatures of local polar and nematic order
appears in the system. This state is also characterised by strong density
fluctuations. Furthermore, we identify an activity-driven cross-over from this
state of coherently flowing bundles of filaments to a phase with no global
flow, formed by individual filaments coiled into rotating spirals. This
suggests a mechanism where the system responds to activity by changing the
shape of active agents, an effect with no analogue in systems of active
particles without internal degrees of freedom.Comment: extended and updated versio
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