13 research outputs found

    Genome assembly of <i>Zeugodacus </i><i>tau</i>

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    Fasta file of genome assembly for the Genome assembly of Zeugodacus tau</p

    Annotation results of <i>Zeugodacus </i><i>tau </i>genome

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    Annotation results of Zeugodacus tau genome using eggNOG</p

    Genome structure annotation of <i>Zeugodacus </i><i>tau</i>

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    GFF file of genome annotation of Zeugodacus tau</p

    Genome assembly of Frankliniella intonsa

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    Genome assembly and annotation of Frankliniella intonsa</p

    Amino acid sequences of <i>Zeugodacus </i><i>tau </i>protein-coding genes

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    Fasta file of amino acid sequences of Zeugodacus tau protein-coding genes.</p

    Genome assembly and annotation of the western flower thrips <i>Frankliniella occidentalis</i>

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    Frankliniella_occidentalis_genome_assembly.fa: genome assembly file of Frankliniella occidentalisFrankliniella_occidentalis_gene_structure_annotation.gff: genome structure annotation file of Frankliniella occidentalisFrankliniella_occidentalis_protein_coding_gene.fa: protein file of Frankliniella occidentalis </p

    Chromosome-level genome and annotation of the two-spotted spider mite <i>Tetranychus urticae</i>

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    We assembled chromosome-level genomes of Tetranychus urticae using Illumina, Nanopore, and Hi-C sequencing technologies. The assembled contigs had a total length of 103.94 Mb (N50 of 3.46 Mb), but this was reduced to 87.7 Mb following scaffolding to the chromosome level. This genome had BUSCO completeness of 94.8% and exhibited high synteny to previously published TSSM genome assemblies. We identified 15,604 protein-coding genes with a BUSCO completeness of 93.4%. The high-quality genome provides invaluable resources for the genetic and evolutionary study of TSSM.</p

    Genome annotation of <i>Grapholita funebrana</i>

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    gf.fasta.gz: Compressed file of genome assembly for Grapholita funebrana.gene_annotation.gff3: Gene annotationout.emapper.function_annotations.xlsx: Gene function annotation</p

    Amino acid sequences of <i>Monochamus</i> <i>alternatus</i><i> </i>protein-coding genes

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    Fasta file of amino acid sequences of Monochamus alternatus protein-coding genes.</p

    Genome structure annotation of <i>Monochamus</i> <i>alternatus</i>

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    GFF file of genome annotation of Monochamus alternatus</p
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