8 research outputs found
miRNA levels in plasma samples.
Levels of miRNAs hsa-miR-21-5p (n = 4) (A) and hsa-miR-126-3p (n = 5) (B) extracted from platelet-poor plasma, EVs captured on magnetic beads (MB), and supernatant after MB concentration were measured relative to the spike-in exogenous cel-miR-238-3p by RT-qPCR. Data are expressed as mean ± SEM (** p p t test).</p
Enumerations and size profiling of particles using NTA.
Small EVs (sEV) were defined as EVs smaller than 100 nm in diameter. Data are expressed as mean ± SEM from three measurements.</p
The schematic diagram of the experimental procedure.
EVs in human plasma samples were first isolated using anti-CD63 antibody-coated magnetic beads. Captured EVs were then eluted for whole particle assays, such as transmission electron microscopy and nanoparticle tracking analysis. In addition, captured EVs were lysed for studying their molecular contents, including proteins and RNAs. EV-miRNAs were extracted using oligonucleotide-conjugated magnetic beads and subjected to subsequent analysis.</p
Levels of EV-miR-126-3p and cf-miR-126-3p were quantified and compared with the levels of conventional CVD biomarkers.
Concentrations of cTnI and NT-proBNP were determined by enzyme-linked immunosorbent assays (ELISA) performed in NCKUH. EV-derived miR-126-3p showed negative correlations with cTnI (n = 6) (A) and NT-proBNP (n = 8) (B), while cell-free miR-126-3p showed weaker correlations with both protein biomarkers (C and D).</p
Nanoparticle and protein analysis of MB eluates and DUC concentrates.
Transmission electron micrographs of negatively stained EVs isolated and eluted from magnetic beads (MB) or pelleted by differential ultracentrifugation (DUC) methods from PPP. Scale bars represent 100 nm. The double-layer character of EV membranes could be discerned at increased magnification (insets) (A). Enumeration of nanoparticles in MB eluate and DUC concentrate by NTA (B). Protein levels were quantified using MicroBCA assays. The ratio of nanoparticle concentration to μg protein was plotted as a relative measure of purity (C). Data are expressed as mean ± SEM from three measurements (** p t-test).</p
Levels of EV-miR-126-3p in plasma samples from healthy volunteers and high-risk CVD patients.
A box-and-whisker chart shows measured EV-miR-126-3p concentrations in plasma samples from healthy volunteers (n = 18) and CVD patients with elevated levels of cTnI (> 0.5 ng/mL) or NT-proBNP (> 0.125 ng/mL) (n = 10) (A). The sensitivity and specificity were 100% and 94%, respectively, when the threshold EV-miR-126-3p concentration was 50 fM. The area under the receiver operating characteristic (ROC) curve was close to 1 and much greater than that of a randomly selected case shown as a straight line at a 45° angle (B).</p
Nanoparticle analysis (NTA) of supernatants and eluates.
NTA was utilized to determine the number (A) and size profile (B) of nanoparticles in the starting platelet-poor plasma (PPP), supernatant after EV enrichment, eluate after formic acid-mediated EV release from magnetic beads. Data are expressed as mean ± SEM (n = 3, ** p p t-test).</p
