11 research outputs found
Динаміка та аналіз виробничого травматизму та професійних захворювань в Україні
Кожного року в Україні на виробництві травмується понад 10 тис.
людей, з них гине понад 600 осіб. Оптимістична, на перший погляд,
статистика, за якою травматизм на виробництві за роки незалежності України
зменшився в десять разів, виявляється не такою вже й оптимістичною, коли
аналізуються конкретні цифри
Additional file 3 of Genetic deletion of nitric oxide synthase 2 ameliorates Parkinson’s disease pathology and neuroinflammation in a transgenic mouse model of synucleinopathy
Additional file 3: Table S2. One-way ANOVA (Tukey’s test) and significance of the results of the in vivo experiments in this study
Additional file 1 of Genetic deletion of nitric oxide synthase 2 ameliorates Parkinson’s disease pathology and neuroinflammation in a transgenic mouse model of synucleinopathy
Additional file 1: Figure S1. The nos2 mRNA expression was not detected in SynA53T/NOS2−/− mice. Figure S2. The p-SynSer129 levels in the cortex, caudate and putamen, and hippocampus were significantly diminished in SynA53T/NOS2−/− mice compared with SynA53T mice. Figure S3. The number of Iba-1/GFAP-positive cells and % area fractions in the substantia nigra, deep mesencephalic nucleus, and granular insular cortex were significantly reduced in SynA53T/NOS2−/− mice compared with SynA53T mice. Figure S4. The Iba-1-fluorescence intensity, number of Iba-1-positive cells, and % area fractions in the cortex, caudate and putamen, and hippocampus were significantly suppressed in SynA53T/NOS2−/− mice compared with SynA53T mice. Figure S5. The GFAP-fluorescence intensity, number of GFAP-positive cells, and % area fractions in the cortex, caudate and putamen, and hippocampus were significantly downregulated in SynA53T/NOS2−/− mice compared with SynA53T mice. Materials and methods
DataSheet_1_Epigenetic therapy reprograms M2-type tumor-associated macrophages into an M1-like phenotype by upregulating miR-7083-5p.docx
Reprogramming M2-type, pro-tumoral tumor-associated macrophages (TAMs) into M1-type, anti-tumoral macrophages is a key strategy in cancer therapy. In this study, we exploited epigenetic therapy using the DNA methylation inhibitor 5-aza-2’-deoxycytidine (5-aza-dC) and the histone deacetylation inhibitor trichostatin A (TSA), to reprogram M2-type macrophages into an M1-like phenotype. Treatment of M2-type macrophages with the combination of 5-aza-dC and TSA decreased the levels of M2 macrophage cytokines while increasing those of M1 macrophage cytokines, as compared to the use of either therapy alone. Conditioned medium of M2 macrophages treated with the combination of 5-aza-dC and TSA sensitized the tumor cells to paclitaxel. Moreover, treatment with the combination inhibited tumor growth and improved anti-tumor immunity in the tumor microenvironment. Depletion of macrophages reduced the anti-tumor growth activity of the combination therapy. Profiling of miRNAs revealed that the expression of miR-7083-5p was remarkably upregulated in M2 macrophages, following treatment with 5-aza-dC and TSA. Transfection of miR-7083-5p reprogrammed the M2-type macrophages towards an M1-like phenotype, and adoptive transfer of M2 macrophages pre-treated with miR-7083-5p into mice inhibited tumor growth. miR-7083-5p inhibited the expression of colony-stimulating factor 2 receptor alpha and CD43 as candidate targets. These results show that epigenetic therapy upon treatment with the combination of 5-aza-dC and TSA skews M2-type TAMs towards the M1-like phenotype by upregulating miR-7083-5p, which contributes to the inhibition of tumor growth.</p
Additional file 2 of Genetic deletion of nitric oxide synthase 2 ameliorates Parkinson’s disease pathology and neuroinflammation in a transgenic mouse model of synucleinopathy
Additional file 2: Table S1. The lists of the 1,339 DEGs included in the individual clusters
Patterns of Gene and Metabolite Define the Effects of Extracellular Osmolality on Kidney Collecting Duct
To investigate the effects of changes in extracellular
osmolality on the function of kidney collecting duct cells, particularly
on water and sodium reabsorption in the conditions of diuresis and
antidiuresis, we generated transcriptome and metabolome profiles of
primary cultured inner medullary collecting duct (IMCD) cells. They
were grown in hyperosmolar culture medium (640 mOsm) for 4 days and
then exposed to either reduced (300 mOsm) or same osmolality for 1
or 2 days more. Integrated analysis of the transcriptome and metabolome
revealed that decreased extracellular osmolality was associated with
decreased levels of organic osmolytes, glucose, intermediates of citric
acid cycle, and branched-chain amino acids (BCAA) in IMCD cells, along
with significantly decreased gene expression and protein abundance
of P-type transporters (ATP1B1), ABC transporters (ABCC5 and ABCG1),
and insulin signaling pathways (IRS2). Quantitative real-time RT-PCR
and semiquantitative immunoblotting confirmed the changes of transcript
levels of differentially expressed genes and protein levels. Taken
together, integrated analysis of omics data demonstrated that water
and sodium reabsorption could be reduced by decreased extracellular
osmolality per se, through decreased levels of ABC transporters and
IRS2, which play a potential role in the transport of organic osmolytes,
BCAA, glucose, and trafficking of epithelial sodium channel
Patterns of Gene and Metabolite Define the Effects of Extracellular Osmolality on Kidney Collecting Duct
To investigate the effects of changes in extracellular
osmolality on the function of kidney collecting duct cells, particularly
on water and sodium reabsorption in the conditions of diuresis and
antidiuresis, we generated transcriptome and metabolome profiles of
primary cultured inner medullary collecting duct (IMCD) cells. They
were grown in hyperosmolar culture medium (640 mOsm) for 4 days and
then exposed to either reduced (300 mOsm) or same osmolality for 1
or 2 days more. Integrated analysis of the transcriptome and metabolome
revealed that decreased extracellular osmolality was associated with
decreased levels of organic osmolytes, glucose, intermediates of citric
acid cycle, and branched-chain amino acids (BCAA) in IMCD cells, along
with significantly decreased gene expression and protein abundance
of P-type transporters (ATP1B1), ABC transporters (ABCC5 and ABCG1),
and insulin signaling pathways (IRS2). Quantitative real-time RT-PCR
and semiquantitative immunoblotting confirmed the changes of transcript
levels of differentially expressed genes and protein levels. Taken
together, integrated analysis of omics data demonstrated that water
and sodium reabsorption could be reduced by decreased extracellular
osmolality per se, through decreased levels of ABC transporters and
IRS2, which play a potential role in the transport of organic osmolytes,
BCAA, glucose, and trafficking of epithelial sodium channel
Patterns of Gene and Metabolite Define the Effects of Extracellular Osmolality on Kidney Collecting Duct
To investigate the effects of changes in extracellular
osmolality on the function of kidney collecting duct cells, particularly
on water and sodium reabsorption in the conditions of diuresis and
antidiuresis, we generated transcriptome and metabolome profiles of
primary cultured inner medullary collecting duct (IMCD) cells. They
were grown in hyperosmolar culture medium (640 mOsm) for 4 days and
then exposed to either reduced (300 mOsm) or same osmolality for 1
or 2 days more. Integrated analysis of the transcriptome and metabolome
revealed that decreased extracellular osmolality was associated with
decreased levels of organic osmolytes, glucose, intermediates of citric
acid cycle, and branched-chain amino acids (BCAA) in IMCD cells, along
with significantly decreased gene expression and protein abundance
of P-type transporters (ATP1B1), ABC transporters (ABCC5 and ABCG1),
and insulin signaling pathways (IRS2). Quantitative real-time RT-PCR
and semiquantitative immunoblotting confirmed the changes of transcript
levels of differentially expressed genes and protein levels. Taken
together, integrated analysis of omics data demonstrated that water
and sodium reabsorption could be reduced by decreased extracellular
osmolality per se, through decreased levels of ABC transporters and
IRS2, which play a potential role in the transport of organic osmolytes,
BCAA, glucose, and trafficking of epithelial sodium channel
Patterns of Gene and Metabolite Define the Effects of Extracellular Osmolality on Kidney Collecting Duct
To investigate the effects of changes in extracellular
osmolality on the function of kidney collecting duct cells, particularly
on water and sodium reabsorption in the conditions of diuresis and
antidiuresis, we generated transcriptome and metabolome profiles of
primary cultured inner medullary collecting duct (IMCD) cells. They
were grown in hyperosmolar culture medium (640 mOsm) for 4 days and
then exposed to either reduced (300 mOsm) or same osmolality for 1
or 2 days more. Integrated analysis of the transcriptome and metabolome
revealed that decreased extracellular osmolality was associated with
decreased levels of organic osmolytes, glucose, intermediates of citric
acid cycle, and branched-chain amino acids (BCAA) in IMCD cells, along
with significantly decreased gene expression and protein abundance
of P-type transporters (ATP1B1), ABC transporters (ABCC5 and ABCG1),
and insulin signaling pathways (IRS2). Quantitative real-time RT-PCR
and semiquantitative immunoblotting confirmed the changes of transcript
levels of differentially expressed genes and protein levels. Taken
together, integrated analysis of omics data demonstrated that water
and sodium reabsorption could be reduced by decreased extracellular
osmolality per se, through decreased levels of ABC transporters and
IRS2, which play a potential role in the transport of organic osmolytes,
BCAA, glucose, and trafficking of epithelial sodium channel
Patterns of Gene and Metabolite Define the Effects of Extracellular Osmolality on Kidney Collecting Duct
To investigate the effects of changes in extracellular
osmolality on the function of kidney collecting duct cells, particularly
on water and sodium reabsorption in the conditions of diuresis and
antidiuresis, we generated transcriptome and metabolome profiles of
primary cultured inner medullary collecting duct (IMCD) cells. They
were grown in hyperosmolar culture medium (640 mOsm) for 4 days and
then exposed to either reduced (300 mOsm) or same osmolality for 1
or 2 days more. Integrated analysis of the transcriptome and metabolome
revealed that decreased extracellular osmolality was associated with
decreased levels of organic osmolytes, glucose, intermediates of citric
acid cycle, and branched-chain amino acids (BCAA) in IMCD cells, along
with significantly decreased gene expression and protein abundance
of P-type transporters (ATP1B1), ABC transporters (ABCC5 and ABCG1),
and insulin signaling pathways (IRS2). Quantitative real-time RT-PCR
and semiquantitative immunoblotting confirmed the changes of transcript
levels of differentially expressed genes and protein levels. Taken
together, integrated analysis of omics data demonstrated that water
and sodium reabsorption could be reduced by decreased extracellular
osmolality per se, through decreased levels of ABC transporters and
IRS2, which play a potential role in the transport of organic osmolytes,
BCAA, glucose, and trafficking of epithelial sodium channel
