Vegetation analysis in the Laramie Basin, Wyoming from ERTS-1 imagery

The author has identified the following significant results. The application of ERTS-1 imagery to vegetation mapping and identification was tested and confirmed by field checking. ERTS-1 imagery interpretation and density contour mapping allows definition of minute vegetation features and estimation of vegetative biomass and species composition. Large- and small-scale vegetation maps were constructed for test areas in the Laramie Basin and Laramie mountains of Wyoming. Vegetative features reflecting grazing intensity, moisture availability, changes within the growing season, cutting of hay crops, and plant community constituents in forest and grassland are discussed and illustrated. Theoretical considerations of scattering, sun angle, slope, and instrument aperture upon image and map resolution were investigated. Future suggestions for applications of ERTS-1 data to vegetative analysis are included

High Speed Phase-Resolved 2-d UBV Photometry of the Crab pulsar

We report a phase-resolved photometric and morphological analysis of UBV data of the Crab pulsar obtained with the 2-d TRIFFID high speed optical photometer mounted on the Russian 6m telescope. By being able to accurately isolate the pulsar from the nebular background at an unprecedented temporal resolution (1 \mu s), the various light curve components were accurately fluxed via phase-resolved photometry. Within the $UBV$ range, our datasets are consistent with the existing trends reported elsewhere in the literature. In terms of flux and phase duration, both the peak Full Width Half Maxima and Half Width Half Maxima decrease as a function of photon energy. This is similarly the case for the flux associated with the bridge of emission. Power-law fits to the various light curve components are as follows; \alpha = 0.07 \pm 0.19 (peak 1), \alpha = -0.06 \pm 0.19 (peak 2) and \alpha = -0.44 \pm 0.19 (bridge) - the uncertainty here being dominated by the integrated CCD photometry used to independently reference the TRIFFID data. Temporally, the main peaks are coincident to \le 10 \mu s although an accurate phase lag with respect to the radio main peak is compromised by radio timing uncertainties. The plateau on the Crab's main peak was definitively determined to be \leq 55 \mu s in extent and may decrease as a function of photon energy. There is no evidence for non-stochastic activity over the light curves or within various phase regions, nor is there evidence of anything akin to the giant pulses noted in the radio. Finally, there is no evidence to support the existence of a reported 60 second modulation suggested to be as a consequence of free precession.Comment: 13 pages, 12 figures, accepted for publication in Astronomy & Astrophysic

CATHEDRAL: A Fast and Effective Algorithm to Predict Folds and Domain Boundaries from Multidomain Protein Structures

We present CATHEDRAL, an iterative protocol for determining the location of previously observed protein folds in novel multidomain protein structures. CATHEDRAL builds on the features of a fast secondary-structure–based method (using graph theory) to locate known folds within a multidomain context and a residue-based, double-dynamic programming algorithm, which is used to align members of the target fold groups against the query protein structure to identify the closest relative and assign domain boundaries. To increase the fidelity of the assignments, a support vector machine is used to provide an optimal scoring scheme. Once a domain is verified, it is excised, and the search protocol is repeated in an iterative fashion until all recognisable domains have been identified. We have performed an initial benchmark of CATHEDRAL against other publicly available structure comparison methods using a consensus dataset of domains derived from the CATH and SCOP domain classifications. CATHEDRAL shows superior performance in fold recognition and alignment accuracy when compared with many equivalent methods. If a novel multidomain structure contains a known fold, CATHEDRAL will locate it in 90% of cases, with <1% false positives. For nearly 80% of assigned domains in a manually validated test set, the boundaries were correctly delineated within a tolerance of ten residues. For the remaining cases, previously classified domains were very remotely related to the query chain so that embellishments to the core of the fold caused significant differences in domain sizes and manual refinement of the boundaries was necessary. To put this performance in context, a well-established sequence method based on hidden Markov models was only able to detect 65% of domains, with 33% of the subsequent boundaries assigned within ten residues. Since, on average, 50% of newly determined protein structures contain more than one domain unit, and typically 90% or more of these domains are already classified in CATH, CATHEDRAL will considerably facilitate the automation of protein structure classification

Metamorphic temperature investigation of coexisting calcite and dolomite marble––examples from Nikani Ghar marble and Nowshera Formation, Peshawar Basin, Pakistan

Using marble samples from the Nikani Ghar marble and Nowshera Formation from Northern Pakistan the determination of the temperature of metamorphism was undertaken with the help of calcite-dolomite solvus geothermometer. Two types of marbles, that is, calcite-dolomite marble and quartz-bearing calcite-dolomite marble were selected. Petrographic and scanning electron microscope analysis of dolomite samples indicated different grain sizes. X-ray diffraction technique indicated the calcites MgCO₃ content up to 7.93 mol.%. Nikani Ghar marble samples have shown lower contents of MgCO₃ as compared to samples from Nowshera Formation. The calcite-dolomite-quartz marble has also showed relatively lower MgCO₃ content and hence rather low temperature (~500 °C). The temperature reached during peak metamorphism of the investigated marble occurrence, based on calcitedolomite solvus was 628 °C. Metamorphic temperatures derived from the present study were shown as a linear graph and values were in good agreement with the published literature.The authors acknowledge the financial support extended by the Higher Education Commission (HEC), Pakistan and National Academy of Sciences (USA), project ID 131, under the PAK-USA S & T Cooperation Program, Award (No. 0521315). The authors are grateful to the HEC, Pakistan for their support in the form of “International Research Support Initiative Program (IRSIP)” to conduct a part of research at Department of Earth Sciences, University of Cambridge, United 996 Muhammad Fahad, Yaseen Iqbal, Mohammad Riaz, Rick Ubic and Simon A. T. Redfern Kingdom. The financial support extended by the Directorate of S & T, KP regarding minerals upgradation is also acknowledged

Tissue biochemical diversity of 20 gooseberry cultivars and the effect of ethylene supplementation on postharvest life

The European gooseberry (Ribes uva-crispa) is still an understudied crop with limited data available on its biochemical profile and postharvest life. A variety of polyphenols were detected in the skin and flesh of 20 gooseberry cvs, representing mainly flavonol glycosides, anthocyanins and flavan-3-ols. In contrast, gooseberry seeds were for the first time characterised by the presence of considerable amounts of hydroxycinnamic acid glycosides tentatively identified by UPLC-QToF/MS. All cvs examined represented a good source of vitamin C while being low in sugar. Furthermore, the postharvest stability of bioactives was explored by supplementation of exogenous ethylene in air at 5 °C. Results suggest a low sensitivity of gooseberries to ethylene. The overall quality of gooseberries remained stable over two weeks, showing potential for extended bioactive life

Detection of Outliers in Time Series.

As part of a SERC funded project this study aims to summarise the most relevant and recent literature with respect to outlier detection for time series and missing value estimation in traffic count data. Many types of transport data are collected over time and are potentlally suited to the application of time series analysis techniques. including accident data, ticket sales and traffic counts. Missing data or outliers in traffic counts can cause problems when analysing the data, for example in order to produce forecasts. At present it seems that little work has been undertaken to assess the merits of alternative methods to treat such data or develop a more analytic approach. Here we intend to review current practices in the transport field and summarise more general time series techniques for handling outlying or missing data. The literature study forms the fist stage of a research project aiming to establish the applicability of time series and other techniques in estimating missing values and outlier detection/replacement in a variety of transport data. Missing data and outliers can occur for a variety of reasons, for example the breakdown of automatic counters. Initial enquiries suggest that methods for patching such data can be crude. Local authorities are to be approached individually usinga short questionnaire enquiry form in order to attempt to ascertain their current practices. Having reviewed current practices the project aims to transfer recently developed methods for dealing with outliers in general time series into a transport context. It is anticipated that comparisons between possible methods could highlight an alternative and more analytical approach to current practices. A description of the main methods ior detecting outliers in time series is given within the first section. In the second section practical applications of Box-Jenkins methods within a transport context are given. current practices for dealing with outlying and missing data within transport are discussed in section three. Recommendations for methods to be used in our current research are followed by the appendices containing most of the mathematical detail

Dynamically relevant recurrent flows obtained via a nonlinear recurrence function from two-dimensional turbulence

Funding: DL was supported by EPSRC New Investigator Award EP/S037055/1 “Stabilisation of exact coherent structures in fluid turbulence”, ER was supported by a Keele University PGR studentship, AL was supported by the St Andrews Research Internship Scheme.This paper demonstrates the efficient extraction of unstable recurrent flows from two-dimensional turbulence by using nonlinear triads to diagnose recurrence in direct numerical simulations. Nearly recurrent episodes are identified from simulations and then converged using a standard Newton- GMRES-hookstep method, however with much greater diversity than previous studies which per- formed this ‘recurrent flow analysis’. Unstable periodic and relative periodic orbits are able to be identified which span larger values of dissipation rate, i.e. corresponding to extreme bursting events. The triad variables are found to provide a more natural way to weight the greater variety of spatial modes active in such orbits than a standard Euclidian norm of complex Fourier amplitudes. Moreover the triad variables build in a reduction of the continuous symmetry of the system which avoids the need to search over translations when obtaining relative periodic orbits. Armed with these orbits we investigate optimal weightings when reconstructing the statistics of turbulence and suggest that, in fact, a simple heuristic weighting based on the solution instability provides a very good prediction, provided enough dynamically relevant orbits are included in the expansion.Peer reviewe

Using Administrative Data to Count Local Populations

There is growing evidence that official population statistics based on the decennial census are inaccurate at the local authority level—the fundamental administrative unit of the UK. This paper investigates the use of locally available administrative data sets for counting populations. The method uses truth tables for combining different data sources with different population coverage according to a defined and therefore replicable set of rules. The result is timelier and geographically more flexible data which is more cost-effective to produce than a survey-based census. Associated techniques for linking diverse data sources at individual and household level are briefly discussed. The methodology is then applied to administrative data from a London borough with about 170,000 people. The results are evaluated and compared with other population sources. The paper concludes by discussing potential improvements including scaling up the work to cover multiple local authorities. The practicalities of using alternative central government data sets are briefly considered. A sequel paper in this journal provides examples of key applications of this approach at local level