Additional file 3 of Identification of key gene networks related to the freezing resistance of apricot kernel pistils by integrating hormone phenotypes and transcriptome profiles

Additional file 3: Table S4. The raw expression information of DEGs in two apricot kernel cultivars under freezing stress

Additional file 2 of Identification of key gene networks related to the freezing resistance of apricot kernel pistils by integrating hormone phenotypes and transcriptome profiles

Additional file 2: Table S2. The expression information of genes in the transcriptome of two apricot kernel cultivars

Additional file 5 of Identification of key gene networks related to the freezing resistance of apricot kernel pistils by integrating hormone phenotypes and transcriptome profiles

Additional file 5: Table S6. Annotation of hub genes in the brown module

Additional file 4 of Identification of key gene networks related to the freezing resistance of apricot kernel pistils by integrating hormone phenotypes and transcriptome profiles

Additional file 4: Table S5. The expression level of DEGs related to plant hormone signaling transduction in two apricot kernel cultivars under freezing stress

Additional file 1 of Identification of key gene networks related to the freezing resistance of apricot kernel pistils by integrating hormone phenotypes and transcriptome profiles

Additional file 1: Fig. S1. Clustering and PCA of transcriptomes of CsL and CtW. Fig. S2. Venn diagram of the DEGs related to plant hormone signaling transduction identified in CsL, CtW and CsL vs CtW. Table S1. List of primers used for qRT-PCR. Table S3. Summary of mapping transcriptome reads to reference sequence

Additional file 3: Figure S2.

Amino acid sequence alignments of 14 conserved motifs. (TIF 219 kb

Additional file 4: Table S2.

Components analysis in the amino acid of middle regions of 14 PsARF proteins. (XLSX 14 kb

Additional file 6: Table S4.

Function and GO annotation of co-expression genes correlated with ARFs. + means the correlation of co-expressed genes with corresponding ARF, and – means no correlation of co-expressed genes with corresponding ARF. (XLSX 198 kb

Additional file 1: Table S1. of Identification of AUXIN RESPONSE FACTOR gene family from Prunus sibirica and its expression analysis during mesocarp and kernel development

Primer sequences used for real-time PCR. (DOCX 19 kb

Additional file 5: Table S3.

Co-expression analysis of ARF genes. (XLSX 74 kb