68 research outputs found
The First Enantioenriched Metalated Nitrile Possessing Macroscopic Configurational Stability
Magnesium−bromine exchange on enantiopure cyclopropyl bromonitrile 5 at −100 °C for 1 min followed by a D2O quench gives the deuterionitrile
in 81% ee (retention); additional trapping experiments establish t1/2(rac) = 11.4 h at −100 °C. These experiments provide the first glimpse into
the stereochemical aspects of Mg−Br exchange. The intermediate formed is the first metalated nitrile demonstrated to possess macroscopic
configurational stability
Computational Studies of Ion-Pair Separation of Benzylic Organolithium Compounds in THF: Importance of Explicit and Implicit Solvation
Ion-pair separation (IPS) of THF-solvated fluorenyl (1C), diphenylmethyl (2C), and trityl (3C) lithium was studied computationally. Minimum energy equilibrium geometries of explicit bis- and tris-solvated contact ion pairs (CIPs) and tetrakis-solvated separated ion pairs (SIPs) were located at B3LYP/6-31G*. Associative transition structures linking the tris-solvated CIPs and tetrakis-solvated SIPs were also located. Based on MP2/6-31G*//B3LYP/6-31G* energies, the resting states of the CIPs are predicted to be trisolvates. Calculated enthalpies of IPS (ΔHIPS) at 298 K were compared to experimental (UV−vis spectroscopy) solution values reported in the literature. In vacuum, B3LYP/6-31G* ΔHIPS values for 1C·(THF)3−3C·(THF)3 are 6−8 kcal/mol less exothermic than the experimentally determined values in THF solution. Closer examination of the individual steps of ion-pair separation (ionization, solvation, ion-pair recombination), as well as comparison of calculated structures with the published X-ray structures of 1C·(THF)3 and 3S·(THF)4, suggested that in vacuo modeling of the SSIPs was problematic. Incorporation of secondary solvation in the form of Onsager and PCM single-point calculations showed an increase in exothermicity of IPS. Application of a continuum solvation model (Onsager) during optimization at the B3LYP/6-31G* level of theory produced significant changes in the Cα−Li contact distances in the SSIPs, and B3LYP/6-31G* (PCM)//B3LYP/6-31G* (Onsager) energies bring ΔHIPS within 5−6 kcal/mol of experiment. Possible strategies to achieve closer agreement with experiment are discussed
Regioselective Synthesis of Aniline-Derived 1,3- and <i>C</i><sub>i</sub>-Symmetric 1,4-Diols from <i>trans</i>-1,4-Cyclohexadiene Dioxide
trans-Diepoxide 1 is well-known to react with aliphatic amines and the azide ion to give exclusively the 1,3-diol products. However, we observed that by judicious choice of conditions, reaction with anilines can give predominantly the 1,3-diol (3) or the heretofore rarely seen Ci-symmetric 1,4-diol (4). Synthesis of an unsymmetrical 1,4-diol from two different anilines is also demonstrated. These studies demonstrate that an intramolecular anilino−NH hydrogen bond donor can direct Fürst−Plattner epoxide opening
Highly Enantioselective Synthesis of Rigid, Quaternary 1,4-Benzodiazepine-2,5-diones Derived from Proline
Proline-derived 1,4-benzodiazepine-2,5-diones are extremely useful scaffolds in medicinal chemistry. In this paper, we describe a protocol for
retentive C3 alkylation of these materials, thus accomplishing the direct synthesis of enantiopure quaternary 1,4-benzodiazepine-2,5-diones.
The high enantioselectivities (up to 99.5%) are attributed to memory of chirality
Effective Computational Modeling of Constitutional Isomerism and Aggregation States of Explicit Solvates of Lithiated Phenylacetonitrile
We present the first calculations which accurately account for the position of metalation and
aggregation state of lithiated nitriles. Solvation is found to be a key determinant of structure. Five
known solvates of lithiated phenylacetonitrile were examined computationally to determine the
minimum level of theory required to reproduce the observed X-ray and multinuclear NMR
structures. In all cases Hartree−Fock 3-21G energies of explicit solvates calculated at PM3
geometries correctly predict the observed N-lithiated constitutional isomer. Selected density
functional theory (B3LYP/6-31+G*//PM3) energy calculations reproduce this trend. We also show
that 3-21G//PM3 calculations which do not include explicit solvent molecules, or which include
water as a model for diethyl ether, may lead to incorrect predictions of the preferred constitutional
isomer. 3-21G//PM3 energies also adequately account for observed aggregation states of the TMEDA,
diethyl ether, and THF solvates. Finally, calculations of THF-solvated monomers up to the B3LYP/6-31+G*//B3LYP/6-31+G* level indicate a significant (6.8 kcal/mol) preference for N-lithiation
<sup>7</sup>Li/<sup>31</sup>P NMR Studies of Lithiated Arylacetonitriles in THF−HMPA Solution: Characterization of HMPA-Solvated Monomers, Dimers, and Separated Ion Pairs
The structures of lithiated phenylacetonitrile and 1-naphthylacetonitrile were studied in THF and
HMPA−THF solution. In pure THF, 7Li NMR line width studies suggest that these species exist as contact
ion pairs; HMPA titration studies confirm this conclusion. In the presence of 0.25−2 equiv of HMPA, HMPA-solvated monomeric and dimeric contact ion pairs are detected by 31P and 7Li NMR spectroscopy. Finally, at
4−6 equiv of added HMPA, 7Li NMR spectra provide direct evidence for the formation of HMPA-solvated
separated ion pairs
Experimental and Computational Studies of Ring Inversion of 1,4-Benzodiazepin-2-ones: Implications for Memory of Chirality Transformations
We recently reported the enantioselective syntheses of quaternary 1,4-benzodiazepin-2-ones via
memory of chirality. The success of this method depends on formation of conformationally chiral
enolates that racemize very slowly under the reaction conditions. As a prelude to undertaking
experimental and computational studies on the racemization of these enolates, we have studied
the ring-inversion process of the parent 1,4-benzodiazepin-2-ones. In this paper, we use dynamic
and 2D-EXSY NMR to characterize inversion barriers. Using DFT calculations, we reproduce the
experimental results with high accuracy (within 1−2 kcal/mol). Structural parameters obtained
from DFT calculations provide valuable insights into the important effect of the N1 substituent on
the ring-inversion barrier and shed light on the mechanism of the memory of chirality method.
These measurements and calculations provide a foundation for future studies of benzodiazepine
enolates and will be valuable in the design of new memory of chirality reactions
Protonated 2-Methyl-1,2-epoxypropane: A Challenging Problem for Density Functional Theory
Protonated epoxides feature prominently in organic chemistry as reactive intermediates. Herein, we describe
10 protonated epoxides using B3LYP, MP2, and CCSD/6-311++G** calculations. Relative to CCSD,
B3LYP consistently overestimates the C2−O bond length. Protonated 2-methyl-1,2-epoxypropane is the
most problematic species studied, where B3LYP overestimates the C2−O bond length by 0.191 Å.
Seventeen other density functional methods were applied to this protonated epoxide; on average, they
overestimated the CCSD bond length by 0.2 Å. We present a range of data that suggest the difficulty for
DFT methods in modeling the structure of the titled protonated epoxide lies in the extremely weak C2−O
bond, which is reflected in the highly asymmetric charge distribution between the two ring carbons.
Protonated epoxides featuring more symmetrical charge distribution and cyclic homologues featuring
less ring strain are treated with greater accuracy by B3LYP. Finally, MP2 performed very well against
CCSD, deviating in the C2−O bond length at most by 0.009 Å; it is, therefore, recommended when
computational resources prove insufficient for coupled cluster methods
Stereochemical Inversion of a Cyano-Stabilized Grignard Reagent: Remarkable Effects of the Ethereal Solvent Structure and Concentration
Chiral
organometallic reagents are useful in asymmetric synthesis,
and configurational stability of these species is critical to success.
In this study we followed the epimerization of a chiral Grignard reagent,
prepared by Mg/Br exchange of bromonitrile <i>trans</i>-<b>2b</b>. This compound underwent highly retentive Mg/Br exchange
in Et<sub>2</sub>O; less retention was observed in 2-MeTHF and THF.
Epimerization rate constants <i>k</i><sub>tc</sub> were
determined at 195 K by measuring the diastereomer ratio of deuteration
product <i>d</i><sub>1</sub>-<b>3b</b> as a function
of the delay time before quench. Studies were also performed at varying
concentrations of Et<sub>2</sub>O in toluene. Remarkable dynamic range
in <i>k</i><sub>tc</sub> was seen: relative to reaction
at 0.12 M Et<sub>2</sub>O in toluene, epimerization was 26-, 800-,
and 1300-fold faster in Et<sub>2</sub>O, 2-MeTHF, and THF, respectively.
Thus, the identity and concentration of an ethereal solvent can dramatically
affect configurational stability. Reaction stoichiometry experiments
suggested that, in Et<sub>2</sub>O, the Grignard reagent derived from <i>trans</i>-<b>2b</b> exists as an <i>i</i>-PrMgCl
heterodimer; the invariance of <i>k</i><sub>tc</sub> over
a 20-fold range in [Mg]<sub>total</sub> ruled out mandatory deaggregation
(or aggregation) on the epimerization path. Analysis of the dependency
of <i>k</i><sub>tc</sub> on [Et<sub>2</sub>O] and temperature
in Et<sub>2</sub>O/toluene solution at 195, 212, and 231 K indicated
fast incremental solvation before rate-limiting ion-pair separation
and provided an estimate of the entropic cost of capturing a solvent
ligand (−13 ± 3 eu). Calculations at the MP2/6-31G*(PCM)//B3LYP/6-31G*
level provide support for these conclusions and map out a possible
“ionogenic conducted tour” pathway for epimerization
Catalytic Asymmetric Synthesis of Protected Tryptophan Regioisomers
Tryptophan 1 (Trp) is superior to all other
naturally occurring peptide residues in its ability to bind
cations (the cation−π interaction). In an effort to expand the
toolbox of Trp-like amino acids, in this note we report
catalytic asymmetric syntheses of Trp regioisomers 2a−e,
where the alanine unit is attached not to C-3 of indole but
to C-2, C-4, C-5, C-6, or C-7. Excellent asymmetric induction
is obtained in each case (generally >97% ee). Ab initio
calculations suggest that the indole nuclei of 2a−e will bind
Na+ with the same affinity as that of Trp
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