56 research outputs found
A Combined Wave Function and Density Functional Approach for K‑Edge X‑ray Absorption Near-Edge Spectroscopy: A Case Study of Hydrated First-Row Transition Metal Ions
The prediction of X-ray absorption spectra (XAS) of transition
metal complexes has important and broad application areas in chemistry
and biology. In this letter, we have investigated the predictive ability
of multiconfiguration pair-density functional theory (MC-PDFT) for
X-ray absorption spectra by calculating the metal K pre-edge features
of aquated 3d transition metal ions in common oxidation
states. MC-PDFT results were compared with experimentally measured
spectra as well as analyzed against results from restricted active-space
second-order perturbation theory (RASPT2) and time-dependent density
functional theory (TDDFT). As expected, TDDFT performs well for excited
states that can be accurately represented by singly excited configurations
but fails for excited states where higher order excitations become
important. On the other hand, both RASPT2 and MC-PDFT provide quantitatively
accurate results for all excited states irrespective of their character.
While core-level spectroscopy with RASPT2 is accurate, it is computationally
expensive. Our results show that MC-PDFT performs equally well with
significantly lower computational cost and is an encouraging alternate
approach for X-ray spectroscopies
Scalar Relativistic Computations of Nuclear Magnetic Shielding and <i>g</i>-Shifts with the Zeroth-Order Regular Approximation and Range-Separated Hybrid Density Functionals
Density functional theory (DFT) calculations of NMR chemical shifts
and molecular g tensors with Gaussian-type orbitals
are implemented via second-order energy derivatives within the scalar
relativistic zeroth order regular approximation (ZORA) framework.
Nonhybrid functionals, standard (global) hybrids, and range-separated
(Coulomb-attenuated, long-range corrected) hybrid functionals are
tested. Origin invariance of the results is ensured by use of gauge-including
atomic orbital (GIAO) basis functions. The new implementation in the
NWChem quantum chemistry package is verified by calculations of nuclear
shielding constants for the heavy atoms in HX (X = F, Cl, Br, I, At)
and H2X (X = O, S, Se, Te, Po) and 125Te chemical
shifts in a number of tellurium compounds. The basis set and functional
dependence of g-shifts is investigated for 14 radicals
with light and heavy atoms. The problem of accurately predicting 19F NMR shielding in UF6–nCln, n = 1–6,
is revisited. The results are sensitive to approximations in the density
functionals, indicating a delicate balance of DFT self-interaction
vs correlation. For the uranium halides, the range-separated functionals
are not clearly superior to global hybrids
Evidence of Skewness and Sub-Gaussian Character in Temperature-Dependent Distributions of One Million Electronic Excitation Energies in PbS Quantum Dots
Obtaining
statistical distributions by sampling a large number
of conformations is vital for an accurate description of temperature-dependent
properties of chemical systems. However, constructing distributions
with 105–106 samples is computationally
challenging because of the prohibitively high computational cost of
performing first-principles quantum mechanical calculations. In this
work, we present a new technique called the effective stochastic potential
configuration interaction singles (ESP-CIS) method to obtain excitation
energies. The ESP-CIS method uses random matrix theory for the construction
of an effective stochastic representation of the Fock operator and
combines it with the CIS method. Excited-state energies of PbS quantum
dots (0.75–1.75 nm) at temperatures of 10–400 K were
calculated using the ESP-CIS method. Results from a total of 27 million
excitation energy calculations revealed the distributions to be sub-Gaussian
in nature with negative skewness, which progressively became red-shifted
with increasing temperature. This study demonstrates the efficacy
of the ESP-CIS method as a general-purpose method for efficient excited-state
calculations
Monitoring Long-Range Electron Transfer Pathways in Proteins by Stimulated Attosecond Broadband X‑ray Raman Spectroscopy
Long-range
electron transfer (ET) is a crucial step in many energy
conversion processes and biological redox reactions in living organisms.
We show that newly developed X-ray pulses can directly probe the evolving
oxidation states and the electronic structure around selected atoms
with detail not available through conventional time-resolved infrared
or optical techniques. This is demonstrated in a simulation study
of the stimulated X-ray Raman (SXRS) signals in Re-modified azurin,
which serves as a benchmark system for photoinduced ET in proteins.
Nonlinear SXRS signals offer a direct novel window into the long-range
ET mechanism
Basis Set Selection for Molecular Core-Level <i>GW</i> Calculations
The GW approximation has been recently
gaining
popularity among the methods for simulating molecular core-level X-ray
photoemission spectra. Traditionally, Gaussian-type orbital GW core-level binding energies have been computed using
either the cc-pVnZ or def2-nZVP
basis set families, extrapolating the obtained results to the complete
basis set limit, followed by an element-specific relativistic correction.
Despite achieving rather good accuracy, it has been previously stated
that these binding energies are chronically underestimated. In the present work, we show that those previous studies obtained
results that were not well-converged with respect to the basis set
size and that, once basis set convergence is achieved, there seems
to be no such underestimation. Standard techniques known to offer
a good cost-accuracy ratio in other theories demonstrate that the
cc-pVnZ and def2-nZVP families exhibit
contraction errors and might lead to unreliable complete basis set
extrapolations for absolute binding energies, often deviating about
200–500 meV from the putative basis set limit found in this
work. On the other hand, uncontracted versions of these basis sets
offer vastly improved convergence. Even faster convergence can be
obtained using core-rich property-optimized basis set families like
pcSseg-n, pcJ-n, and ccX-nZ. Finally, we also show that the improvement observed
for core properties using these specialized basis sets does not degrade
their description of valence excitations: vertical ionization potentials
and electron affinities computed with these basis sets converge as
fast as the ones obtained with the aug-cc-pVnZ family,
thus offering a balanced description of both core and valence regions
Simulating Valence-to-Core X‑ray Emission Spectroscopy of Transition Metal Complexes with Time-Dependent Density Functional Theory
Valence-to-core (VtC) X-ray emission
spectroscopy (XES) has emerged
as a powerful technique for the structural characterization of complex
organometallic compounds in realistic environments. Since the spectrum
represents electronic transitions from the ligand molecular orbitals
to the core holes of the metal centers, the approach is more chemically
sensitive to the metal–ligand bonding character compared with
conventional X-ray absorption techniques. In this paper we study how
linear-response time-dependent density functional theory (LR-TDDFT)
can be harnessed to simulate K-edge VtC X-ray emission spectra reliably.
LR-TDDFT allows one to go beyond the single-particle picture that
has been extensively used to simulate VtC-XES. We consider seven low-
and high-spin model complexes involving chromium, manganese, and iron
transition metal centers. Our results are in good agreement with experiment
Optimal Tuning Perspective of Range-Separated Double Hybrid Functionals
We study the optimal tuning of the
free parameters in range-separated
double hybrid functionals, based on enforcing the exact conditions
of piecewise linearity and spin constancy. We find that introducing
the range separation in both the exchange and the correlation terms
allows for the minimization of both fractional charge and fractional
spin errors for singlet atoms. The optimal set of parameters is system
specific, underlining the importance of the tuning procedure. We test
the performance of the resulting optimally tuned functionals for the dissociation curves of diatomic
molecules. We find that they recover the correct dissociation curve
for the one-electron system, H2+, and improve
the dissociation curves of many-electron molecules such as H2 and Li2, but they also yield a nonphysical maximum and
only converge to the correct dissociation limit at very large distances
Scalable Molecular GW Calculations: Valence and Core Spectra
We
present a scalable implementation of the GW approximation
using Gaussian atomic orbitals to study the valence
and core ionization spectroscopies of molecules. The implementation
of the standard spectral decomposition approach to the screened-Coulomb
interaction, as well as a contour-deformation method, is described.
We have implemented both of these approaches using the robust variational
fitting approximation to the four-center electron repulsion integrals.
We have utilized the MINRES solver with the contour-deformation approach
to reduce the computational scaling by 1 order of magnitude. A complex
heuristic in the quasiparticle equation solver further allows a speed-up
of the computation of core and semicore ionization energies. Benchmark
tests using the GW100 and CORE65 data sets and the carbon 1s binding
energy of the well-studied ethyl trifluoroacetate, or ESCA molecule,
were performed to validate the accuracy of our implementation. We
also demonstrate and discuss the parallel performance and computational
scaling of our implementation using a range of water clusters of increasing
size
Resonant X‑ray Sum-Frequency-Generation Spectroscopy of K‑Edges in Acetyl Fluoride
Resonant X-ray sum-frequency generation is calculated
for excitations
of the fluorine and the oxygen core K-edge in acetyl fluoride using
real-time time-dependent density functional theory. The signal is
generated by an extreme-ultraviolet pulse followed by an X-ray pulse
with variable delay T. The X-ray pulse is tuned to different element-specific core excitations
and used to probe the dynamics of a valence electronic wave packet.
A two-dimensional signal is recorded depending on the dispersed X-ray
pulse frequency and the frequency conjugated to T, revealing the couplings between core and valence excited states.
Molecular orbital decomposition of the signal reveals which regions
of the molecule contribute to the X-ray excitation
Spectral Signatures of Ultrafast Excited-State Intramolecular Proton Transfer from Computational Multi-edge Transient X‑ray Absorption Spectroscopy
Excited-state intramolecular proton
transfer (ESIPT) is a fundamental
chemical process with several applications. Ultrafast ESIPT involves
coupled electronic and atomic motions and has been primarily studied
using femtosecond optical spectroscopy. X-ray spectroscopy is particularly
useful because it is element-specific and enables direct, individual
probes of the proton-donating and -accepting atoms. Herein, we report
a computational study to resolve the ESIPT in 10-hydroxybenzo[h]quinoline (HBQ), an intramolecularly hydrogen bonded compound.
We use linear-response time-dependent density functional theory (LR-TDDFT)
combined with ab initio molecular dynamics (AIMD)
and time-resolved X-ray absorption spectroscopy (XAS) computations
to track the ultrafast excited-state dynamics. Our results reveal
clear X-ray spectral signatures of coupled electronic and atomic motions
during and following ESIPT at the oxygen and nitrogen K-edge, paving
the way for future experiments at X-ray free electron lasers
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