Do environmental variables predict the trophic structure of fish fauna in a subtropical river (Uruguay River Ecoregion)?

Trophic interactions represent the routes through which energy flows upwards within ecosystems and the understanding of such structuring under varying environmental conditions is still challenging. Here we test the hypothesis that differences in environmental variables act as environmental filters on the composition and trophic structure of local the fish fauna of a subtropical mountain river. We predict that differences in the trophic structure of the fish fauna occur along the river continuum. Main environmental parameters have been measured and fishes were sampled quarterly between August 2013 and May 2014 at six sampling sites in the main channel of the Pelotas River, Upper Uruguay ecoregion. We collected 3848 individuals belonging to 38 species, 4 orders and 11 families. The most (82.1%) consisted of small- and medium-sized individuals. The species were classified into eight trophic guilds: aquatic insectivorous, carnivorous, detritivorous, detritivorous/aquatic insectivorous, herbivorous, iliophagous, omnivorous and piscivorous. In general, herbivorous and piscivorous guilds were the most representative in both number and biomass. Significant differences detected by Permanova were for richness, numerical abundance and biomass between all the sites sampled. Relationships between the environmental variables and the composition of trophic guilds were observed along the longitudinal gradient by RLQ and fourth-corner analyses. The abundance of guilds omnivorous, aquatic insectivorous and herbivorous increases with higher values of chlorophyll-a and vegetation cover, especially characterizing the upstream sites (S1, S2 and S3). On the other hand, the abundance of the iliophagous, detritivorous/insectivorous and piscivorous guilds increases with greater values of width, temperature, inorganic phosphorus and total solids, a fact observed in downstream sites (S4, S5 and S6). Thus, it was possible to identify a clear variation in the trophic structure of the fish fauna along the Pelotas River (upstream-downstream), in which the local variables were efficient in predicting environmental filters that influence the trophic organization. In this scenario, our study follows the longitudinal model and evidences a greater accumulation of energy in food webs in the upstream-downstream direction, which favors the greatest abundance of piscivorous, detritivorous and iliophagous verified in stretches of greater volume and dimensions of river. These results highlight the importance of the local variables and the interrelationships in the lateral connectivity processes along the river continuum

[Dataset] Understanding temporal variability across trophic levels and spatial scales in freshwater ecosystems

A tenet of ecology is that temporal variability in ecological structure and processes tends to decrease with increasing spatial scales (from locales to regions) and levels of biological organization (from populations to communities). However, patterns in temporal variability across trophic levels and the mechanisms that produce them remain poorly understood. Here we analyzed the abundance time series of spatially structured communities (i.e., metacommunities) spanning basal resources to top predators from 355 freshwater sites across three continents. Specifically, we used a hierarchical partitioning method to disentangle the propagation of temporal variability in abundance across spatial scales and trophic levels. We then used structural equation modeling to determine if the strength and direction of relationships between temporal variability, synchrony, biodiversity, and environmental and spatial settings depended on trophic level and spatial scale. We found that temporal variability in abundance decreased from producers to tertiary consumers but did so mainly at the local scale. Species population synchrony within sites increased with trophic level, whereas synchrony among communities decreased. At the local scale, temporal variability in precipitation and species diversity were associated with population variability (linear partial coefficient, β = 0.23) and population synchrony (β = -0.39) similarly across trophic levels, respectively. At the regional scale, community synchrony was not related to climatic or spatial predictors, but the strength of relationships between metacommunity variability and community synchrony decreased systematically from top predators (β = 0.73) to secondary consumers (β = 0.54), to primary consumers (β = 0.30) to producers (β = 0). Our results suggest that mobile predators may often stabilize metacommunities by buffering variability that originates at the base of food webs. This finding illustrates that the trophic structure of metacommunities, which integrates variation in organismal body size and its correlates, should be considered when investigating ecological stability in natural systems. More broadly, our work advances the notion that temporal stability is an emergent property of ecosystems that may be threatened in complex ways by biodiversity loss and habitat fragmentation.Code and data to reproduce the results in Siqueira et al. (submitted) published as a Preprint (https://doi.org/10.32942/osf.io/mpf5x) The full set of results, including those made available as supplementary material, can be reproduced by running five scripts in the R_codes folder following this sequence: 01_Dataprep_stability_metrics.R 02_SEM_analyses.R 03_Stab_figs.R 04_Stab_supp_m.R 05_Sensit_analysis.R and using the data available in the Input_data folder. The original raw data made available include the abundance (individual counts, biomass, coverage area) of a given taxon, at a given site, in a given year. See details here https://doi.org/10.32942/osf.io/mpf5x However, this is a collaborative effort and not all authors are allowed to share their raw data. One data set (LEPAS), out of 30, was not made available due to data sharing policies of The Ohio Division of Wildlife (ODOW). So, in code "01_Dataprep_stability_metrics.R" all data made available are imported, except the LEPAS data set. For this specific data set, code "01_Dataprep_stability_metrics.R" imports variability and synchrony components estimated using the methods described in Wang et al. (2019 Ecography; doi/10.1111/ecog.04290), diversity metrics (alpha and gamma diversity), and some variables describing the data set. A protocol for requesting access to the LEPAS data sets can be found here: https://ael.osu.edu/researchprojects/lake-erie-plankton-abundance-study-lepas Dataset owner: Ohio Department of Natural Resources – Division of Wildlife, managed by Jim Hood, Dept. of Evolution, Ecology, and Organismal Biology, The Ohio State University. Email: [email protected] Anyone who wants to reproduce the results described in the preprint can just download the whole R project (that includes code and data) and run codes from 01 to 05. I am making the whole R project folder (with everything needed to reproduce the results) available as a compressed file.Peer reviewe

Catálogo Taxonômico da Fauna do Brasil: setting the baseline knowledge on the animal diversity in Brazil

The limited temporal completeness and taxonomic accuracy of species lists, made available in a traditional manner in scientific publications, has always represented a problem. These lists are invariably limited to a few taxonomic groups and do not represent up-to-date knowledge of all species and classifications. In this context, the Brazilian megadiverse fauna is no exception, and the Catálogo Taxonômico da Fauna do Brasil (CTFB) (http://fauna.jbrj.gov.br/), made public in 2015, represents a database on biodiversity anchored on a list of valid and expertly recognized scientific names of animals in Brazil. The CTFB is updated in near real time by a team of more than 800 specialists. By January 1, 2024, the CTFB compiled 133,691 nominal species, with 125,138 that were considered valid. Most of the valid species were arthropods (82.3%, with more than 102,000 species) and chordates (7.69%, with over 11,000 species). These taxa were followed by a cluster composed of Mollusca (3,567 species), Platyhelminthes (2,292 species), Annelida (1,833 species), and Nematoda (1,447 species). All remaining groups had less than 1,000 species reported in Brazil, with Cnidaria (831 species), Porifera (628 species), Rotifera (606 species), and Bryozoa (520 species) representing those with more than 500 species. Analysis of the CTFB database can facilitate and direct efforts towards the discovery of new species in Brazil, but it is also fundamental in providing the best available list of valid nominal species to users, including those in science, health, conservation efforts, and any initiative involving animals. The importance of the CTFB is evidenced by the elevated number of citations in the scientific literature in diverse areas of biology, law, anthropology, education, forensic science, and veterinary science, among others

Effects of a small fish cage farm on zooplankton assemblages (Cladocera and Copepoda: Crustacea) in a sub-tropicalreservoir (SE Brazil).

In Brazil, the environmental impacts of fish cage farming in water reservoirs have not been well studied. As this activity is being increasingly practiced, investigations on the impacts of this practice are strongly needed. The goal of this study was to investigate the effects of a small cage tilapia farm on zooplankton assemblages in an oligo/mesotrophic reservoir (Jurumirim Reservoir, Paranapanema River). Zooplankton, limnological variables, and water samples were obtained trimonthly during a year at two sample sites, one was located adjacent to the cage farm and the control area was located one kilometer away from it. Eighteen species were identified and Cladocera was the dominant group. The same species of microcrustaceans were identified at both sites. Among the ecological attributes studied, only evenness showed a tendency towards being higher in the control site. Significant differences between studied variables in the sites were observed only for material in suspension. The results of the study indicate that, during the studied period, the cage farm did not generate detectable changes in the zooplankton assemblages and their ecological attributes. However, small differences in some limnological variables could be an indication of some environmental changes associated with the fish farm system.Universidade Estadual Paulista, UNESP, Rubiao Junior, s/n, CEP 18618-000, Botucatu, SP, BrazilUniversidade Estadual Paulista, UNESP, Rubiao Junior, s/n, CEP 18618-000, Botucatu, SP, Brazi

Baixa riqueza zooplanctônica indicando condições adversas de seca e eutrofização em um reservatório no Nordeste do Brasil

RESUMO Esse trabalho caracterizou o zooplâncton e as variáveis ambientais do reservatório Canoas (Assaré, Ceará, Brasil) através de oito coletas consecutivas mensais, durante um período de estiagem intensa. Amostras de zooplâncton foram coletadas com arrastos verticais de rede de plâncton de 50 µm em três pontos distribuídos longitudinalmente. Foram encontradas cinco espécies: Brachionus calicyflorus Pallas, 1938 (Brachionidae: Rotifera), Diaphanosoma spinulosum Herbst, 1967 (Sididae: Cladocera), Thermocyclops decipiens Kiefer, 1929 e T. inversus Kiefer, 1936 (Cyclopoida: Copepoda), e Notodiaptomus cearensis Wright, 1936 (Calanoida: Copepoda). Thermocyclops decipiens apresentou a maior abundância relativa, seguido de N. cearensis e B. calicyflorus. A variação espacial e temporal da comunidade zooplanctônica pode ser explicada pela maioria das variáveis ambientais associadas a N. cearensis e B. calicyflorus, enquanto T. decipiens não se associou a nenhuma delas. A baixa riqueza de espécies e a dominância de T. decipiens e B. calicyflorus podem ser reflexos da elevada condição trófica do reservatório, em período de estiagem intensa, e N. cearensis está associado também com essas condições mais adversas.</jats:p

Effects of a small fish cage farm on zooplankton assemblages (Cladocera and Copepoda: Crustacea) in a sub-tropical reservoir (SE Brazil)

In Brazil, the environmental impacts of fish cage farming in water reservoirs have not been well studied. As this activity is being increasingly practiced, investigations on the impacts of this practice are strongly needed. The goal of this study was to investigate the effects of a small cage tilapia farm on zooplankton assemblages in an oligo/mesotrophic reservoir (Jurumirim Reservoir, Paranapanema River). Zooplankton, limnological variables, and water samples were obtained trimonthly during a year at two sample sites, one was located adjacent to the cage farm and the control area was located one kilometer away from it. Eighteen species were identified and Cladocera was the dominant group. The same species of microcrustaceans were identified at both sites. Among the ecological attributes studied, only evenness showed a tendency towards being higher in the control site. Significant differences between studied variables in the sites were observed only for material in suspension. The results of the study indicate that, during the studied period, the cage farm did not generate detectable changes in the zooplankton assemblages and their ecological attributes. However, small differences in some limnological variables could be an indication of some environmental changes associated with the fish farm system.Universidade Estadual Paulista UNESP, Rubião Júnior, s/n, CEP 18618-000, Botucatu, SPUniversidade Estadual do Norte do Paraná UENP, Rua Portugal, 340. Centro, CEP 86300-000, Cornélio Procópio, PRCentro de Desenvolvimento em Aqüicultura e Pesca CEDAP/EPAGRI Rodovia Admar Gonzaga, 1.188. Itacorubi, CEP 88034-901, Caixa Postal 502, Florianópolis, SCUniversidade Estadual do Oeste do Paraná UNIOESTE, Rua Universitária, 2.069. Jardim Universitario, CEP 85819-110, Cascavel, PRUniversidade Estadual Paulista UNESP, Rubião Júnior, s/n, CEP 18618-000, Botucatu, S

Understanding temporal variability across trophic levels and spatial scales in freshwater ecosystems

Abstract A tenet of ecology is that temporal variability in ecological structure and processes tends to decrease with increasing spatial scales (from locales to regions) and levels of biological organization (from populations to communities). However, patterns in temporal variability across trophic levels and the mechanisms that produce them remain poorly understood. Here we analyzed the abundance time series of spatially structured communities (i.e., metacommunities) spanning basal resources to top predators from 355 freshwater sites across three continents. Specifically, we used a hierarchical partitioning method to disentangle the propagation of temporal variability in abundance across spatial scales and trophic levels. We then used structural equation modeling to determine if the strength and direction of relationships between temporal variability, synchrony, biodiversity, and environmental and spatial settings depended on trophic level and spatial scale. We found that temporal variability in abundance decreased from producers to tertiary consumers but did so mainly at the local scale. Species population synchrony within sites increased with trophic level, whereas synchrony among communities decreased. At the local scale, temporal variability in precipitation and species diversity were associated with population variability (linear partial coefficient, β = 0.23) and population synchrony (β = −0.39) similarly across trophic levels, respectively. At the regional scale, community synchrony was not related to climatic or spatial predictors, but the strength of relationships between metacommunity variability and community synchrony decreased systematically from top predators (β = 0.73) to secondary consumers (β = 0.54), to primary consumers (β = 0.30) to producers (β = 0). Our results suggest that mobile predators may often stabilize metacommunities by buffering variability that originates at the base of food webs. This finding illustrates that the trophic structure of metacommunities, which integrates variation in organismal body size and its correlates, should be considered when investigating ecological stability in natural systems. More broadly, our work advances the notion that temporal stability is an emergent property of ecosystems that may be threatened in complex ways by biodiversity loss and habitat fragmentation.Abstract A tenet of ecology is that temporal variability in ecological structure and processes tends to decrease with increasing spatial scales (from locales to regions) and levels of biological organization (from populations to communities). However, patterns in temporal variability across trophic levels and the mechanisms that produce them remain poorly understood. Here we analyzed the abundance time series of spatially structured communities (i.e., metacommunities) spanning basal resources to top predators from 355 freshwater sites across three continents. Specifically, we used a hierarchical partitioning method to disentangle the propagation of temporal variability in abundance across spatial scales and trophic levels. We then used structural equation modeling to determine if the strength and direction of relationships between temporal variability, synchrony, biodiversity, and environmental and spatial settings depended on trophic level and spatial scale. We found that temporal variability in abundance decreased from producers to tertiary consumers but did so mainly at the local scale. Species population synchrony within sites increased with trophic level, whereas synchrony among communities decreased. At the local scale, temporal variability in precipitation and species diversity were associated with population variability (linear partial coefficient, β = 0.23) and population synchrony (β = −0.39) similarly across trophic levels, respectively. At the regional scale, community synchrony was not related to climatic or spatial predictors, but the strength of relationships between metacommunity variability and community synchrony decreased systematically from top predators (β = 0.73) to secondary consumers (β = 0.54), to primary consumers (β = 0.30) to producers (β = 0). Our results suggest that mobile predators may often stabilize metacommunities by buffering variability that originates at the base of food webs. This finding illustrates that the trophic structure of metacommunities, which integrates variation in organismal body size and its correlates, should be considered when investigating ecological stability in natural systems. More broadly, our work advances the notion that temporal stability is an emergent property of ecosystems that may be threatened in complex ways by biodiversity loss and habitat fragmentation