218 research outputs found

    Disorder in crystal structures : new approaches in finding the best model

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    A new approach has been implemented in the refinement program CRYSTALS that enables the crystallographer to treat structures with disordered parts in an intuitive way, improving the refined models and saving a considerable amount of time. Roughly half of all crystal structure analyses suffer from some kind of problems. Many of them are problems involving disorder, which keep the crystallographer busy, often for many hours and days. Many disordered structures can be described rationally as the molecule taking advantage of one or more of its degrees of freedom. However, an equivalent easy approach is not provided by the traditional way to build crystallographic models for refinement. New scripts in CRYSTALS now help the scientist to deal with disorder with more ease. The scripting environment in CRYSTALS provides a mechanism for formalising procedures which have to be repeated frequently and partially automating them. The new scripts help the crystallographer to first regularize the geometry of structural fragments that have become distorted during initial refinement of the starting model. After this step, disorder models with two components are set up by applying a non-crystallographic symmetry operator to the prototype regularised component in order to create a duplicate in the alternative position. Restraints to keep the geometrical features of the disordered fragments within defined boundaries can be created in an automated way. Finally, the user is assisted in the different steps of refining this two-component disorder model before integrating it into the final refinement of the whole structure. On the way through the refinement of the disorder the new scripts keep the model consistent, even in the case where extensions of the disorder assembly or modifications to it are necessary. This feature too results in saving time. Searching errors in long hand edited instruction lists used to be tedious and time consuming. While first tests show promising results the current development is aimed to extend the number of cases this approach can be adapted to. Disorder models with more than two components, assisted model building for disordered solvent molecules, inclusion of non-atomic electron density descriptors in the scripts or the development of validation criteria and tools for the way disorder has been refined are possible fields for future work on the base of this concept

    Collective Syntheses of Icetexane Natural Products Based on Biogenetic Hypotheses

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    A divergent synthesis of 10 icetexane natural products based on a proposed biogenetic cationic ring expansion of a reduced carnosic acid derivative is described. Of these icetexanes, (+)-salvicanol, (−)-cyclocoulterone, (−)-coulterone, (−)-obtusinone D, and (−)-obtusinone E have been synthesized for the first time. In addition, the hypothesis for the non-enzymatic biogenesis of benzo[1,3]dioxole natural products has been experimentally investigated. Additional experimental evidence for the abiotic formation of the methylenedioxy unit is provided, as photolysis of the quinone (+)-komaroviquinone resulted in the formation of the [1,3]dioxole-containing natural product (−)-cyclocoulterone and (+)-komarovispirone

    Scope of the direct trimerisation to C3-symmetric cyclotribenzylene derivatives

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    The scope of the trimerisation reaction of 3-substituted benzyl alcohols was explored. Several C 3 -symmetric cyclotribenzylene derivatives were obtained in preparative useful yields in one step and applied to the short synthesis (one or two steps) of two CTB derivatives, so far only accessible in six or seven linear steps

    Онтологическое описание киберфизических систем на производстве Индустрии 4.0

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    Предлагается схема организации взаимодействия компонентов киберфизических систем на производстве на основе онтологий. Рассматривается производственное предприятие Индустрии 4.0 типа умная фабрика. Основное внимание в статье уделено взаимодействию цифровых двойников оборудования и цифровых двойников технологических процессов с реальным оборудованием предприятия

    New 4,4'-Bis(9-carbazolyl)-Biphenyl Derivatives with Locked Carbazole-Biphenyl Junctions: High-Triplet State Energy Materials

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    We synthesized a series of 4,4'-bis(9-carbazolyl)-biphenyl (CBP) derivatives, using methyl groups as spatially demanding groups, locking the angle between the carbazole subunit and the biphenyl backbone as potential matrix material for blue organic light-emitting diodes (OLEDs). The locked rotation was achieved by four methyl groups either in positions 1 and 8 of the carbazole subunit (1) or in positions 3, 5, 3', and 5' of the biphenyl subunit (2), and the fixed spatial arrangement was confirmed by X-ray analysis. The physical properties of CBP derivatives based on parent structure 2 were further tailored by electron-withdrawing CF3 groups in positions 3 and 6 (3) or positions 2 and 7 of the carbazole subunits (4) or alternatively by electron-donating CH3O groups in positions 2 and 7 (5) of the same building blocks. Increased triplet energies (ET) compared to that of the parent compound CBP were found for all synthesized CBP derivatives 1-5. Enhanced glass transition temperatures ranging between 129 and 202 °C further corroborate the application potential of these derivatives for matrix material in blue OLEDs

    Symmetry as a new element to control molecular switches

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    The isomerization properties of an azocarbazole macrocycle in solution were investigated utilizing NMR spectroscopy with in situ irradiation in combination with DFT calculations. It was demonstrated that the position of azo units in a rigid macrocyclic system influences the photoisomerization pathway even if the initial all-E isomer is highly symmetric. Furthermore, the effect of ring strain on lowering the rates of thermal isomerization was demonstrated and a mechanism via an inversion-rotation proposed. The herein presented results and methods give new insights into the general nature of the azobenzene unit. In particular we illustrate the effect of symmetry changes due to macrocyclic arrangement on the photochemical and thermal isomerization properties, which will stimulate future development towards multinary molecular switches

    Axial versus equatorial coordination of thioether sulfur: mixed ligand copper(ii) complexes of 2-pyridyl-n-(2'-methylthiophenyl)-methyleneimine with bidentate diimine ligands

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    The synthesis, structure and spectral and redox properties of the copper(II) complexes [Cu(pmtpm)Cl2] (1) and [Cu(pmtpm)2](ClO4)2 (6), where pmtpm is the linear tridentate ligand 2-pyridyl-N-(2'-methylthiophenyl)methyleneimine containing a thioether and two pyridine donors, are described. Also, the mixed ligand complexes [Cu(pmtpm)(diimine)](ClO4)2 (2-5), where the diimine is 2,2'-bipyridine (bpy) (2), 1,10-phenanthroline (phen) (3), 2,9-dimethyl-1,10-phenanthroline (2,9-dmp) (4) or dipyrido-[3,2-d:2',3'-f]-quinoxaline (dpq) (5), have been isolated and studied. The X-ray crystal structures of the complexes 1, [Cu(pmtpm)(2,9-dmp)](ClO4)2 4 and 6 have been successfully determined. The complex 1 possesses a trigonal bipyramidal distorted square based pyramidal (TBDSBP) coordination geometry in which three corners of the square plane are occupied by two nitrogens and thioether s of pmtpm ligand and the remaining equatorial and the axial positions by two chloride ions. The complex 4 contains a CuN4S chromophore also with a TBDSBP coordination geometry in which two nitrogens and the thioether sulfur of pmtpm ligand occupy three corners of the square plane. One of the two nitrogens of 2,9-dmp ligand is equatorially coordinated and the other axially to copper. On the other hand, the complex 6 is found to possess a square based pyramidal distorted trigonal bipyramidal (SPDTBP) coordination geometry. The CuN2S trigonal plane in it is comprised of the pyridine and imine nitrogens and the thioether sulfur of the pmtpm ligand. The pyridine nitrogens of the ligand occupy the axial positions and the second thioether sulfur remains uncoordinated. On long standing in acetonitrile solution the mixed ligand complexes 2 and 3 undergo ligand disproportionation to provide the corresponding bis-complexes of bpy and phen, respectively, and 6. The electronic and EPR spectral parameters and the positive redox potential of complex 4 are consistent with the equatorial location of the thioether sulfur in the square-based coordination geometry around copper(II). On the other hand, the higher g|| and lower A|| values and lower E1/2 values for the complexes 2, 3 and 5 are consistent with the axial coordination of the thioether sulfur. Also, the Cu(II)/Cu(I) redox potentials increase with increase in number of aromatic rings of the diimine ligand. The steric and electronic effects of the bidentate diimine ligands in orienting the thioether coordination to axial or equatorial position are discussed

    Conformational analysis of some pyridinium phenolates and synthetic precursors based on X-Ray and IR characterisations

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    7 pagesInternational audienceThis manuscript reports X-Ray and IR characterizations of representative pyridinium phenolates, model compounds for nonlinear optics. These analyses reveal the close dependence existing between molecular structure and the contribution of quinone and zwitterionic limiting forms. The bond length alternation (BLA) values, the well-known parameter correlated to hyperpolarisability β, are also discussed and compared with literature data

    Spin-Delocalization in a Helical Open-Shell Hydrocarbon

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    Neutral open-shell molecules, in which spin density is delocalized through a helical conjugated backbone, hold promise as models for investigating phenomena arising from the interplay of magnetism and chirality. Apart from a handful of examples, however, the chemistry of these compounds remains largely unexplored. Here, we examine the prospect of extending spin-delocalization over a helical backbone in a model compound naphtho[3,2,1- no ]tetraphene, the first helically chiral open-shell hydrocarbon, in which one benzene ring is fused to [5]helicene, forming a phenalenyl subunit. The unpaired electron in this molecule is delocalized over the entire helical core composed of six rings, albeit in a nonuniform fashion, unlike in phenalenyl. In the case of a monosubstituted derivative, the uneven spin-distribution results in a selective σ-dimer formation in solution, as confirmed by 2D NMR spectroscopy. In contrast, the dimerization process is suppressed entirely when four substituents are installed to sterically hinder all reactive positions. The persistent nature of the tetrasubstituted derivative allowed its characterization by EPR, UV–vis, and CD spectroscopies, validating spin-delocalization through a chiral backbone, in accord with DFT calculations. The nonuniform spin-distribution, which dictates the selectivity of the σ-dimer formation, is rationalized by evaluating the aromaticity of the resonance structures that contribute to spin-delocalization

    Pyrrolizidines for direct air capture and CO2 conversion

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    Greenhouse gases such as CO2 strongly contribute to the rising temperatures of our planet, but as long as our society is dependent on fossil fuels, this trend will even increase in the near future. Therefore, CO2 capture and subsequent utilization constitute an approach for decarbonization and CO2 mitigation, and for this purpose, amine scrubbing remains the industrially most established process. In this article, we describe the CO2 capture-ability of pyrrolizidine-based diamines, a scaffold with remarkably good properties to fulfill this challenge. We observed fast equimolar CO2-uptake, as well as high stability of these compounds during multiple capture and release-cycles. In addition, the amines could be utilized for direct air capture. Finally, we demonstrate the utility of the pyrrolizidine absorbents in the reduction of CO2 and for the formation of oxazolidinones
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