7 research outputs found
The Application of Nanoparticles of Waste Tires in Remediating Boron from Desalinated Water
A waste tire rubber (WTR) collected from the remains discarded tires has exhibited a noteworthy capacity to adsorb Boron. In the current study, the boron adsorption remediation from water at selected pH values, initial boron concentration, contact time, adsorbent dosage and particle size were examined using the WTR, the chemically modified WTR, and nano-WTR. The adsorption isotherms were best fitted to the Freundlich model with a high correlation coefficient (R2 :0.89-0.99), while the adsorption kinetics were satisfactorily described by the pseudo second order kinetic equation with correlation coefficient (R2: 1).The boron remediation using the WTR, the chemically modified-WTR and nano-WTR at low boron concentration (≤ 17.7 mg/L) were comparable with other adsorbents. The highest adsorption capacities for WTR, chemically modified-WTR and nano-WTR at initial concentration of 17.5 mg/L were 16.7 ± 1.3 mg/g, 13.8 ± 1.9 mg/g and 12.7 ± 1.8mg/g, respectively.This publication was made possible by UREP # (19-171-1-031) from the Qatar National
Research Fund (a member of Qatar Foundation)
Examination of Glycan Profiles from IgG-Depleted Human Immunoglobulins Facilitated by Microscale Affinity Chromatography
Among the most important proteins involved in disease
and healing
processes are the immunoglobulins (Igs). Although many of the Igs
have been studied through proteomics, aside from IgG, immunoglobulin
carbohydrates have not been extensively characterized in different
states of health. It seems valuable to develop techniques that permit
an understanding of changes in the structures and abundances of Ig
glycans in the context of disease onset and progression. We have devised
a strategy for characterization of the glycans for the Ig classes
other than IgG (i.e., A, D, E, and M) that contain kappa light chains
that requires only a few microliters of biological material. First,
we designed a microcolumn containing recombinant Protein L that was
immobilized on macroporous silica particles. A similarly designed
Protein G microcolumn was utilized to first perform an online depletion
of the IgG from the sample, human blood serum, and thereby facilitate
enrichment of the other Igs. Even though only 3 μL of serum
was used in these analyses, we were able to recover a significantly
enriched fraction of non-IgG immunoglobulins. The enrichment properties
of the Protein L column were characterized using a highly sensitive
label-free quantitative proteomics LC-MS/MS approach, and the glycomic
profiles of enriched immunoglobulins were measured by MALDI-TOF MS.
As a proof of principle, a comparative study was conducted using blood
serum from a small group of lung cancer patients and a group of age-matched
cancer-free individuals to demonstrate that the method is suitable
for investigation of glycosylation changes in disease. The results
were in agreement with a glycomic investigation of whole blood serum
from a much larger lung cancer cohort
Isolation and Purification of Glycoconjugates from Complex Biological Sources by Recycling High-Performance Liquid Chromatography
Among
of the most urgent needs of the glycobiology community is
to generate libraries of pure carbohydrate standards. While many oligosaccharides
have recently been synthesized, some glycans of biomedical importance
are still missing in existing collections or are available in only
limited amounts. To address this need, we demonstrate the use of the
relatively unexplored technique of recycling high-performance liquid
chromatography (R-HPLC) to isolate and purify glycoconjugates from
several natural sources. We were able to routinely achieve purities
greater than 98%. In several cases, we were able to obtain isomerically
pure substances, particularly for glycans with different positional
isomerism. These purified substances can then be used in different
analytical applications, for example, as standards for mass spectrometry
(MS) and capillary-based separations. Moreover, using a bifunctional
aromatic amine, the same derivatization agent can be used to enable
UV detection of oligosaccharides during their purification and link
the isolated molecules to functionalized surfaces and potentially
create glycan arrays
Sub 2‑μm Macroporous Silica Particles Derivatized for Enhanced Lectin Affinity Enrichment of Glycoproteins
A new, mechanically stable silica microparticle with
macrosized
internal pores (1.6 μm particles with 100 nm pores) has been
developed for chromatography. The particles are characterized by an
extensive network of interconnected macropores with a high intraparticle
void volume, as observed by transmission electron microscopy (TEM).
They are synthesized by an aerosol assembly technique called ultrasonic
spray pyrolysis (USP). The particles have a high surface area for
a macroporous material, ∼200 m<sup>2</sup>/g, making them suitable
for large biomolecular separations. To demonstrate their potential
for bioseparations, they have been functionalized with lectins for
affinity enrichment of glycoproteins. The material was derivatized
with two lectins, Concanavalin A (Con A) and Aleuria
aurantia lectin (AAL), and binding properties were
tested with standard glycoproteins. The columns exhibited excellent
binding capacities for microaffinity enrichment: Con A was able to
bind 75 μg of a standard glycoprotein in a 50 × 1 mm column.
Following initial tests, the lectin microcolumns were utilized for
enrichment of glycoproteins from 1 μL volumes of blood serum
samples, performed in triplicate for each lectin. The enriched serum
fractions were subjected to side-by-side glycomic and glycoproteomic
profiling analyses with mass spectrometry to show that the new particles
offer excellent sensitivity for microscale analyses of precious biological
sample materials. The unique combination of the macroporous architecture
and small particle diameter suggests the material may have advantages
for conventional modes of chromatographic separation of macromolecules
in an ultra-high-pressure liquid chromatography (UHPLC) format
Structural Characterization of Serum N‑Glycans by Methylamidation, Fluorescent Labeling, and Analysis by Microchip Electrophoresis
To characterize the structures of
N-glycans derived from human
serum, we report a strategy that combines microchip electrophoresis,
standard addition, enzymatic digestion, and matrix-assisted laser
desorption/ionization-mass spectrometry (MALDI-MS). We compared (i)
electrophoretic mobilities of known N-glycans from well-characterized
(standard) glycoproteins through standard addition, (ii) the electrophoretic
mobilities of N-glycans with their molecular weights determined by
MALDI-MS, and (iii) electrophoretic profiles of N-glycans enzymatically
treated with fucosidase. The key step to identify the sialylated N-glycans
was to quantitatively neutralize the negative charge on both α2,3-
and α2,6-linked sialic acids by covalent derivatization with
methylamine. Both neutralized and nonsialylated N-glycans from these
samples were then reacted with 8-aminopyrene-1,3,6-trisulfonic acid
(APTS) to provide a fluorescent label and a triple-negative charge,
separated by microchip electrophoresis, and detected by laser-induced
fluorescence. The methylamidation step leads to a 24% increase in
the peak capacity of the separation and direct correlation of electrophoretic
and MALDI-MS results. In total, 37 unique N-glycan structures were
assigned to 52 different peaks recorded in the electropherograms of
the serum samples. This strategy ensures the needed separation efficiency
and detectability, easily resolves linkage and positional glycan isomers,
and is highly reproducible
Complementary Glycomic Analyses of Sera Derived from Colorectal Cancer Patients by MALDI-TOF-MS and Microchip Electrophoresis
Colorectal cancer is the fourth most
prevalent cancer in the United
States, yet there are no reliable noninvasive early screening methods
available. Serum-based glycomic profiling has the necessary sensitivity
and specificity to distinguish disease states and provide diagnostic
potential for this deadly form of cancer. We applied microchip electrophoresis
and MALDI-TOF-MS-based glycomic procedures to 20 control serum samples
and 42 samples provided by patients diagnosed with colorectal cancer.
Within the identified glycans, the position of fucose units was located
to quantitate possible changes of fucosyl isomeric species associated
with the pathological condition. MALDI-MS data revealed several fucosylated
tri- and tetra-antennary glycans which were significantly elevated
in their abundance levels in the cancer samples and distinguished
the control samples from the colorectal cancer cohort in the comprehensive
profiles. When compared to other cancers studied previously, some
unique changes appear to be associated with colorectal cancer, being
primarily associated with fucosyl isomers. Through MS and microchip
electrophoresis-based glycomic methods, several potential biomarkers
were identified to aid in the diagnosis and differentiation of colorectal
cancer. With its unique capability to resolve isomers, microchip electrophoresis
can yield complementary analytical information to MS-based profiling