28 research outputs found
Effect of Polymer/Solid and Polymer/Vapor Instantaneous Interfaces on the Interfacial Structure and Dynamics of Polymer Melt Systems
Polymers
are used in a wide range of applications that involve
chemical and physical processes taking place at surfaces or interfaces
which influence the interaction between the polymer material and the
substance that comes into contact with it. Polymer surfaces are usually
modified either chemically or physically for specific applications
such as facilitating wetting, reducing friction, and enhancing adhesion.
The variety and complexity of surface and interfacial processes requires
a molecular-level understanding of the structural and dynamical properties
of the surface/interface layer to help in the design of materials
with desired functional properties. Using molecular dynamics (MD)
simulations, we investigate the structure and dynamics at the surface
of polymer films. We find that the density profiles of the films as
a function of distance relative to an instantaneous surface have a
structure indicative of a layering at the polymer/vapor interface
similar to the typical layered structure observed at the polymer/substrate
interface. However, the interfacial molecules at the polymer/vapor
interface have a higher mobility compared to that in the bulk while
the mobility of the molecules is lower at the polymer/substrate interface.
Time correlation of the instantaneous polymer/vapor interface shows
that surface fluctuations are strongly temperature dependent and are
directly related to the mobility of polymer chains near the interface
Characterizing the Hydrophobicity of Surfaces Using the Dynamics of Interfacial Water Molecules
As most interfacial
processes of practical interest occur in aqueous
media where the presence of water may have an impact on desired functional
properties, it is important to understand the structural and dynamical
properties of interfacial water. Using molecular dynamics simulations,
we investigated the properties of interfacial water molecules in contact
with model atactic polystyrene surfaces of varying polarity. We find
that interfacial water molecules, which do not make hydrogen bonds
with the substrate, have a faster dynamics and appear to have a universal
water–water hydrogen bond relaxation time of about 5 ps. The
diffusion coefficients and the relaxation times of the water molecules
involved in hydrogen bonding with the surface, on the other hand,
have strong dependence on surface polarity and reveal a hydrophobic
to hydrophilic transition regime with contact angle in the range of
40–50°. The results presented will be of broad interest
to researchers working in the area of surface science, biotechnology,
nanotechnology, and in all forms of coating applications
Theta Temperature Depression of Mechanically Interlocked Polymers: [2]catenane as a Model Polymer
Polycatenanes have recently attracted considerable attention
due
to their potential for many applications and as model systems for
understanding the role of mechanical interlocking in the physical
properties of mechanically interlocked polymers. We used molecular
dynamics simulations to investigate the conformational properties
of [2]catenane polymers in solution as a function of the solvent quality
and molecular weight. We found the θ-temperature of [2]catenane
polymers to be depressed compared to their linear and ring counterparts
and follow the relationship θ[2]catenane ring linear. The conformation of the
two rings in [2]catenane is found to be strongly dependent on the
solvent quality. In a good solvent, their conformation is similar
to that of an analogous free ring polymer, while, in a poor solvent,
their conformation significantly deviates from an analogous ring polymer.
Furthermore, the thermal blob size (Nblob) follows the theoretical prediction of the linear relation between Nblob and 1/v2, where v is the excluded
volume, and is found to be strongly dependent on polymer topology
in a poor solvent condition than in a good solvent condition
Nanostructures and Electronic Properties of a High-Efficiency Electron-Donating Polymer
The
development of organic photovoltaic (OPV) solar cells has seeded a
bright hope of achieving low-cost solar energy harvesting. Practical
realization and successful commercialization require enhancing the
efficiency of solar energy harvesting, which, in turn, relies on the
core understanding of structure–property relationships in OPV
materials. Here, we report the first large-scale density functional
calculations of the nanoconformational and electronic properties of
the thieno[3,4-b]thiophene-<i>alt</i>-benzodithiophene copolymer
(PTB7), a high-efficiency OPV material. These first-principles results
include the chain length dependence of the torsional potential, the
nearest-neighbor torsional coupling, the band gap, and the electronic
conjugation length. Importantly, PTB7 was found to have a torsional
potential almost independent of chain length, very weak nearest-neighbor
torsional coupling, a low band gap (∼1.8 eV), and a very long
conjugation length (∼147 Å) compared to the other conjugated
polymers like polythiophene and poly(3-alkylthiophene). These results
suggest that PTB7 can be an efficient electron donor for OPV devices
Local Structure Contributions to Surface Tension of a Stereoregular Polymer
We
have used all-atom molecular dynamics (MD) simulations to calculate
the surface tension of melt poly(methyl methacrylate) (PMMA) as a
function of tacticity. Computation of surface tension using the Kirkwood-Buff
approach required hundreds of nanoseconds of equilibration. The computed
slopes of surface tension versus temperature are in very good agreement
with reported experimental values. Using a rigorous treatment of the
true interface, which takes into account the molecular roughness,
we find that isotactic PMMA, in comparison to syndiotactic and atactic
PMMA, shows a larger surface concentration of polar ester-methyl and
carbonyl groups on the surface versus nonpolar α-methyl groups.
A mechanistic hypothesis based on the helical nature of the isotactic
PMMA chains, their relative flexibility, and their reported conformational
energies is proposed to explain the trends in composition near the
surface. We highlight here how surface composition and surface tension
are controlled by both polarity and steric constraints imposed by
tacticity
Constraints on Knot Insertion, Not Internal Jamming, Control Polycatenane Translocation Dynamics through Crystalline Pores
The translocation of polymers through pores and channels
is an
archetypal process in biology and is widely studied and exploited
for applications in bio- and nanotechnology. In recent times, the
translocation of polymers of various different topologies has been
studied both experimentally and by computer simulation. However, in
some cases, a clear understanding of the precise mechanisms that drive
their translocation dynamics can be challenging to derive. Experimental
methods are able to provide statistical details of polymer translocation,
but computer simulations are uniquely placed to uncover a finer level
of mechanistic understanding. In this work, we use high-throughput
molecular simulations to reveal the importance that knot insertion
rates play in controlling translocation dynamics in the small pore
limit, where unexpected nonpower law behavior emerges. This work both
provides new predictive understanding of polycatenane translocation
and shows the importance of carefully considering the role of the
definition of translocation itself
Adsorptive Structure and Mobility on Carbon Nanotube Exteriors Using Benzoic Acid as a Molecular Probe of Amphiphilic Water Contaminants
Benzoic acid is the simplest aromatic
carboxylic acid that is also
a common water contaminant. Its structural and amphiphilic properties
are shared by many other contaminants of concern. Based on a molecular
dynamics study, this work reports the competitive adsorption of benzoic
acid with water on the curved exteriors of carbon nanotubes of varying
oxygen content. With the help of cylindrically approximated pair correlation
functions, carboxyl–carboxyl associations were found to serve
as an additional mechanism providing stability to the adsorbed benzoic
acid on tube exteriors. These associations are secondary to the main
aromatic–aromatic interactions during the adsorption process
and therefore were not sufficient to establish the energy hierarchy
at the adsorbed state with increase in surface oxygen content. The
same mechanism was previously ascribed to the adsorption of the structurally
similar but bulkier tannic acid. Both water and benzoic acid were
organized into numerous mobility groups and a correspondence was established
between species residence time and the average translation time taken
to escape the tube vicinity. Vigorous exchange of water molecules
among the first adsorption shell, the second adsorption shell, and
the immediate vicinity radially outside was estimated to take place
within a short time of about 10 ps
Template-Induced Enhanced Ordering under Confinement
We report a surprisingly strong ordering of Si−(CH3)2 groups upon confinement between two surfaces,
an oxidized poly(dimethyl siloxane) (PDMSox) elastomer and a methyl-terminated self-assembled monolayer
(octadecyltrichlorosilane (OTS)) on sapphire substrates. This enhanced ordering is induced by the template
of ordered methyl groups of OTS and is not observed for other surfaces (fluorinated monolayers and
sapphire substrates). This strong ordering is reminiscent of layering observed for confined symmetric
molecules between two mica surfaces but was expected to vanish between rough macroscopic surfaces.
These results provide new insights on confined structure at the interface between two solids and are
important in the understanding of surface-controlled processes of practical importance
Molecular Structure of Poly(methyl methacrylate) Surface II: Effect of Stereoregularity Examined through All-Atom Molecular Dynamics
Utilizing all-atom molecular dynamics
(MD), we have analyzed the
effect of tacticity and temperature on the surface structure of poly(methyl
methacrylate) (PMMA) at the polymer–vacuum interface. We quantify
these effects primarily through orientation, measured as the tilt
with respect to the surface normal, and the surface number densities
of the α-methyl, ester-methyl, carbonyl, and backbone methylene
groups. Molecular structure on the surface is a complex interplay
between orientation and number densities and is challenging to capture
through sum frequency generation (SFG) spectroscopy alone. Independent
quantification of the number density and orientation of chemical groups
through all-atom MD presents a comprehensive model of stereoregular
PMMA on the surface. SFG analysis presented in part I of this joint
publication measures the orientation of molecules that are in agreement
with MD results. We observe the ester-methyl groups as preferentially
oriented, irrespective of tacticity, followed by the α-methyl
and carbonyl groups. SFG spectroscopy also points to ester-methyl
being dominant on the surface. The backbone methylene groups show
a very broad angular distribution, centered along the surface plane.
The surface number density ratios of ester-methyl to α-methyl
groups show syndiotactic PMMA having the lowest value. Isotactic PMMA
has the highest ratios of ester- to α-methyl. These subtle trends
in the relative angular orientation and number densities that influence
the variation of surface structure with tacticity are highlighted
in this article. A more planar conformation of the syndiotactic PMMA
along the surface (<i>x</i>–<i>y</i> plane)
can be visualized through the trajectories from all-atom MD. Results
from conformation tensor calculations for chains with any of their
segments contributing to the surface validate the visual observation
Tension Amplification in Tethered Layers of Bottle-Brush Polymers
Molecular
dynamics simulations of a coarse-grained bead–spring
model have been used to study the effects of molecular crowding on
the accumulation of tension in the backbone of bottle-brush polymers
tethered to a flat substrate. The number of bottle-brushes per unit
surface area, Σ, as well as the lengths of the bottle-brush
backbones <i>N</i><sub>bb</sub> (50 ≤ <i>N</i><sub>bb</sub> ≤ 200) and side chains <i>N</i><sub>sc</sub> (50 ≤ <i>N</i><sub>sc</sub> ≤ 200)
were varied to determine how the dimensions and degree of crowding
of bottle-brushes give rise to bond tension amplification along the
backbone, especially near the substrate. From these simulations, we
have identified three separate regimes of tension. For low Σ,
the tension is due solely to intramolecular interactions and is dominated
by the side chain repulsion that governs the lateral brush dimensions.
With increasing Σ, the interactions between bottle-brush polymers
induce compression of the side chains, transmitting increasing tension
to the backbone. For large Σ, intermolecular side chain repulsion
increases, forcing side chain extension and reorientation in the direction
normal to the surface and transmitting considerable tension to the
backbone
