12 research outputs found
Factors influencing wetland distribution and structure, including ecosystem function of ephemeral wetlands, in Nelson Mandela Bay Municipality (NMBM), South Africa
The Nelson Mandela Bay Municipality (NMBM) is a semi-arid area along the southern coastline of South Africa (SA). Until recently, there was no systematic approach to research on wetland systems in the NMBM. The systematic identification of wetlands was made more difficult by the relatively large number of small, ephemeral systems that can be difficult to delineate. This has meant that fundamental knowledge on wetland distribution, structure and function has been limited and, consequently, management and conservation strategies have been based on knowledge on systems from other regions of the country. Environmental processes occur at different spatial and temporal scales. These processes have an effect on the abiotic factors and biotic structure of wetlands, resulting in inherently complex systems. The location of the NMBM provides a good study area to research some of these environmental and biological attributes at different spatial scales, due to the variability in the underlying geology, geomorphology, vegetation types and the spatial and temporal variability in rainfall, within a relatively small area of 1951 km2. Thus, the aim of this study was to determine the factors influencing wetland distribution, structure and ecosystem functioning within the NMBM. The first Research Objective of work presented here was to identify wetlands using visual interpretation of aerial photographs. A total of 1712 wetlands were identified within the NMBM using aerial photographs, covering an area of 17.88 km2 (Chapter 5). The majority of these wetlands were depressions, seeps and wetland flats. Valley bottom wetlands (channelled and unchannelled) and floodplain wetlands were also identified. A range of wetland sizes was recorded, with 86% of the wetlands being less than 1 ha in size and the largest natural wetland being a floodplain wetland of 57 ha, located south of the Swartkops River. The identified wetlands were used to create a wetland occurrence model using logistic regression (LR) techniques (Chapter 5), in accordance with Objective 2 of the study. An accuracy of 66% was obtained, which was considered acceptable for a semi-arid climate with a relatively high degree of spatial and temporal rainfall variability. The model also highlighted several key environmental variables that are associated with wetland occurrence and distribution at various spatial scales. Some of the important variables included precipitation, evapotranspiration, temperature, flow accumulation and groundwater occurrence. Wetland distribution patterns were described in Chapter 6. Spatial statistics were used to identify whether wetlands are clustered and, therefore, form mosaics within the surrounding landscape (Objective 3). Systems were found to be highly clustered, with 43% of wetlands located within 200 m of another system. Clustering and wetland presence was especially prominent in the southern portion of the Municipality, which is also associated with a higher mean annual precipitation. Smaller wetlands were also significantly more clustered than larger systems (Average Nearest Neighbour statistic, p-value < 0.0001). Average distances also significantly varied according to HGM type, with depressions being the most geographically isolated wetland type compared to the other HGM types. Overall, distances between wetlands indicated good proximal connectivity. Potentially vulnerable areas associated with wetland systems were identified successfully using landscape variables, in accordance with Objective 4. These variables were: land cover, slope gradient, flow accumulation, APAN evaporation, mean annual precipitation (MAP) and annual heat units. The existing Critical Biodiversity Network was also used in connection with these variables to further identify potentially vulnerable areas. The abiotic and biotic characteristics were decribed for three hydrogeomorphic (HGM) types at a total of 46 wetland sites (Chapter 7), as per Objective 5. Depressions, seeps and wetland flats were sampled across the different geological, vegetation and rainfall zones within the NMBM. The wetland sites were delineated up to Level 6 of the Classification System used in SA, and the various abiotic and biotic characteristics of these systems were defined. A total of 307 plant, 144 aquatic macroinvertebrate and 10 tadpole species were identified. Of these species, over 90 species were Eastern Cape and SA endemic species, as well as three threatened species on the IUCN Red List. Multivariate analyses (including Bray-Curtis similarity resemblance analyses, distance-based redundancy analyses, SIMPER analyses and BIOENV analysis in Primer), together with environmental data, were used to define community structure at an HGM level, in accordance with Objective 5. The importance of the spatial scale of the environmental data used to define plant and macroinvertebrate community structure was described in Chapter 7, to address Objective 6. The results showed that both broad-scale and site-level characteristics were important in distinguishing community structure within the HGM types that superseded general location, the sample timing or the stage of inundation. These results also indicated that a combination of both landscape and site-level data are important in defining the community structure in the various HGM types. Some of the important environmental variables that explained some of species assemblages were similar to those in the wetland occurrence model (Chapter 5), with some additional hydrological and soil physico-chemical parameters (e.g. soil electrical conductivity, soil pH, and surface and subsurface water nutrients). These significant variables indicate the complex, multi-scalar role of environmental attributes on wetland distribution, structure and function
The zoogeography of the cetaceans in Algoa Bay
The most recent study on cetaceans in Algoa Bay, South Africa, was conducted over 14 years ago. Consequently, knowledge of the cetacean species visiting this bay is currently based on incidental observations and stranding data. A number of developments in recent years: a deepwater port, proposed oil refinery, increased boating and fishing (commercial and recreational), a proposed Marine Protected Area, and the release of a whale-watching permit, all of which may impact these animals in some way, highlight the need for a baseline study on cetaceans. Therefore, the aim of this study was to determine the spatial and temporal distribution, and habitat preference of cetaceans in Algoa Bay. Boat-based surveys were conducted monthly between March 2009 and July 2010. At each sighting the GPS location, species, group size and composition, and behaviour were recorded. Using GIS, the sighting data was related to data layers of geographical variables such as sea surface temperature, depth and sea-floor substrate. Approximately 365 hours of search effort were completed over 57 surveys, with a total of 346 sightings. Species observed were: southern right whales (Eubalaena australis), humpback whales (Megaptera novaeangliae), Bryde’s whales (Balaenoptera brydei), Indian Ocean bottlenose dolphins (Tursiops aduncus), Indo-Pacific humpback dolphins (Sousa chinensis), and longbeaked common dolphins (Delphinus capensis). Southern right whales were observed during austral winter, utilising the shallow, protected areas of the bay as a mating and nursery ground. Humpback whales were also recorded extensively during winter, in more offshore waters, with a significant number of mother-calf pairs sighted. Bryde’s whales were recorded in offshore waters during summer and autumn, where they were primarily observed travelling and foraging. Bottlenose dolphins were the most prolific species sighted. They were recorded year-round throughout the inshore waters of the bay, with large group sizes (up to 500 animals), and displayed a wide variety of behaviours. Humpback dolphins were observed in extremely shallow and inshore waters (mean bottom depth of 6.6 m) along the south-west corner of the bay, in small groups of approximately three individuals. Common dolphins were the least observed species, and were mainly observed foraging in large groups of up to 800 individuals. The results of this study indicate how cetaceans utilise the bay in significantly different ways. Geographical and anthropogenic factors have influenced the spatial and temporal distribution of these animals and have resulted in habitat preferences, as well as potential key habitats, in the bay. Thus, this study has provided baseline information for future research and for better informed conservation and management strategies in Algoa Bay
Swiss results from a global observational study of venous thromboembolism risk and prophylaxis use in the acute care hospital setting: analysis from the ENDORSE study
BACKGROUND: The aim of the present analysis from the epidemiologic international day for the evaluation of patients at risk for venous thromboembolism (VTE) in the acute hospital care setting (ENDORSE) study was to evaluate the prevalence of VTE risk in acute care hospitals and the proportion of at-risk medical and surgical patients who receive recommended prophylaxis in Switzerland.
METHODS: All patients (age \u3eor=40 years) admitted to a medical ward or those (age \u3eor=18 years) admitted to a surgical ward in ten randomly selected Swiss hospitals were assessed for risk of VTE. The 2004 American College of Chest Physicians (ACCP) evidence-based consensus guidelines were used to assess VTE risk and to determine whether patients were receiving recommended thromboprophylaxis.
RESULTS: 2000 patients were eligible; of these 1153 (58%) were in surgical wards, and 847 (42%) in medical wards. According to the ACCP criteria, the proportion of surgical patients at VTE risk was similar in Switzerland (68%, between hospital range 48-86%) in comparison to the global ENDORSE study (64%) (p = 0.296). The rate of at-risk medical patients was lower in Switzerland (21%, range 3-44%) than in the global study (42%) (p \u3c0.001). The proportion of at-risk surgical patients with ACCP-recommended VTE prophylaxis was higher in Switzerland (81%, between-hospital range 76-93%) than in the global study (59%) (p \u3c0.001). Among medical patients at risk, the use of recommended thromboprophylaxis was higher in Switzerland (61%, between-hospital range 0-84%) than in the global ENDORSE (40%) (p \u3c0.001). However 56% of the patients with cancer, 41% with major trauma, and 29% undergoing vascular surgery did not receive any recommended prophylaxis. Among surgical patients at risk, the use of ACCP-recommended prophylaxis was lower in academic (77%) vs. non-academic (86%) institutions (p = 0.0025).
CONCLUSIONS: In Switzerland, although the rate of recommended thromboprophylaxis is higher than in many countries, it is still improvable in medical patients at risk according to the ACCP guidelines. Consequently, hospital wide strategies for systematic risk factor assessment and implementation of practical tools to ensure appropriate use of prophylaxis in patients at VTE risk are required
Associations between prenatal alcohol and tobacco exposure on Doppler flow velocity waveforms in pregnancy: a South African study
Background
The negative impact of prenatal alcohol and tobacco exposure (PAE and PTE) on fetal development and birth outcomes are well described, yet pathophysiologic mechanisms are less clear. Our aim was to investigate (1) the associations between quantity, frequency and timing (QFT) of PAE and PTE with blood flow velocities in arteries of the fetal-placental-maternal circulation and (2) the extent to which combined effect of QFT of PAE and/or PTE and Doppler flow velocity waveforms (FWV) predict infant birth weight.
Methods
The Safe Passage Study is a cohort based in urban Cape Town, South Africa. Recruitment occurred between 2007 and 2015. Information on QFT of PAE and PTE was collected prospectively at up to 4 occasions during pregnancy using a modified Timeline Follow-Back approach. Ultrasound examinations consisted of Doppler flow velocity waveforms of the uterine, umbilical (UA) and fetal middle cerebral arteries for the pulsatility index (PI) at 20–24 and 34–38 weeks. Exclusion criteria included: twin pregnancies, stillbirths, participants exposed to other drugs. The sample was divided into three groups (controls, PAE and PTE) and included 1396 maternal-fetal-dyads assessed during the second trimester; 1398 assessed during the third trimester.
Results
PTE was associated with higher UA PI values in second and third trimesters (p < 0.001), compared to the PAE and control group. The total amount of cigarettes smoked during pregnancy was positively correlated with UA PI values (r = 0.087, p < 0.001). There was a positive correlation between cigarettes smoked per day in trimester one (r = 0.091, p < 0.01), and trimester two (r = 0.075, p < 0.01) and UA PI (in trimester two), as well as cigarettes smoked per day in trimester two (r = 0.058, p < 0.05) and trimester three (r = 0.069, p < 0.05) and the UA PI in trimester three. Generalized additive models indicated that PAE in trimester two, PTE in trimester one and Doppler FWV in trimester three were significant predictors of birth weight in this sample.
Conclusion
In our study, PTE in trimesters two and three resulted in increased vascular resistance of the placenta. These findings highlight nuance in associations between PAE, PTE and blood flow velocities in arteries of the fetal-placental-maternal circulation and birth weight, suggesting that quantity and timing are important factors in these relationships
Earth Observation Strategies For Degradation Monitoring In South Africa With The Sentinels - Results From The Spaces II Saldi-Project
The overarching goal of SALDi (South African Land Degradation MonItor) is to implement novel, adaptive, and sustainable tools for assessing land degradation in multi-use landscapes in South Africa. This presentationdemonstrates results from hyper-temporal Sentinel-1 and -2 timeseries concerning woody cover mapping in complex savanna systems, invasive slangbos bushencroachment in grassland areas and regional soil moisture retrievals. Validation has been performed by cross-comparisons, field trips and permanently installed soil moisture networks
Phenotype and genetic analysis of data collected within the first year of NeuroDev
Genetic association studies have made significant contributions to our understanding of the etiology of neurodevelopmental disorders (NDDs). However, these studies rarely focused on the African continent. The NeuroDev Project aims to address this diversity gap through detailed phenotypic and genetic characterization of children with NDDs from Kenya and South Africa. We present results from NeuroDev’s first year of data collection, including phenotype data from 206 cases and clinical genetic analyses of 99 parent-child trios. Most cases met criteria for global developmental delay/intellectual disability (GDD/ID, 80.3%). Approximately half of the children with GDD/ID also met criteria for autism. Analysis of exome-sequencing data identified a pathogenic or likely pathogenic variant in 13 (17%) of the 75 cases from South Africa and 9 (38%) of the 24 cases from Kenya. Data from the trio pilot are publicly available, and the NeuroDev Project will continue to develop resources for the global genetics community
Blockade of metallothioneins 1 and 2 increases skeletal muscle mass and strength
Abstract
Metallothioneins are proteins that are involved in intracellular zinc storage and transport. Their expression levels have been reported to be elevated in several settings of skeletal muscle atrophy. Here, we demonstrate that these genes are also induced coincident with aging. We therefore investigated the effect of metallothionein blockade on skeletal muscle anabolism in vitro and in vivo, and found that concomitant abrogation of metallothionein 1 and 2 activates the Akt pathway, promotes myotube growth, specifically drives type IIb fiber hypertrophy and ultimately increases muscle strength. Silencing of metallothioneins results in elevated cytosolic zinc; increasing intracellular zinc levels are sufficient to mimic the effects of metallothionein blockade on myotube hypertrophy. We thereby provide direct evidence of the mechanisms by which metallothioneins can modulate skeletal muscle mass. Importantly, the beneficial effects of metallothionein blockade on muscle mass and function are preserved in the presence of a strong catabolic stimulus: treatment with glucocorticoids. Taken together, our results suggest that blockade of metallothioneins constitutes a promising approach for the treatment of muscle diseases
The NeuroDev project: phenotypic and genetic characterization of neurodevelopmental disorders in Kenya and South Africa
Earth Observation Strategies For Degradation Monitoring In South Africa With The Sentinels - Results From The Spaces II Saldi-Project
The overarching goal of SALDi (South African Land Degradation MonItor) is to implement novel, adaptive, and sustainable tools for assessing land degradation in multi-use landscapes in South Africa. This presentationdemonstrates results from hyper-temporal Sentinel-1 and -2 timeseries concerning woody cover mapping in complex savanna systems, invasive slangbos bushencroachment in grassland areas and regional soil moisture retrievals. Validation has been performed by cross-comparisons, field trips and permanently installed soil moisture networks
Earth Observation Strategies For Degradation Monitoring In South Africa With The Sentinels - Results From The Spaces II Saldi-Project
The overarching goal of SALDi (South African Land Degradation MonItor) is to implement novel, adaptive, and sustainable tools for assessing land degradation in multi-use landscapes in South Africa. This presentationdemonstrates results from hyper-temporal Sentinel-1 and -2 timeseries concerning woody cover mapping in complex savanna systems, invasive slangbos bushencroachment in grassland areas and regional soil moisture retrievals. Validation has been performed by cross-comparisons, field trips and permanently installed soil moisture networks