183 research outputs found

    An automated, geometry-based method for hippocampal shape and thickness analysis

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    The hippocampus is one of the most studied neuroanatomical structures due to its involvement in attention, learning, and memory as well as its atrophy in ageing, neurological, and psychiatric diseases. Hippocampal shape changes, however, are complex and cannot be fully characterized by a single summary metric such as hippocampal volume as determined from MR images. In this work, we propose an automated, geometry-based approach for the unfolding, point-wise correspondence, and local analysis of hippocampal shape features such as thickness and curvature. Starting from an automated segmentation of hippocampal subfields, we create a 3D tetrahedral mesh model as well as a 3D intrinsic coordinate system of the hippocampal body. From this coordinate system, we derive local curvature and thickness estimates as well as a 2D sheet for hippocampal unfolding. We evaluate the performance of our algorithm with a series of experiments to quantify neurodegenerative changes in Mild Cognitive Impairment and Alzheimer's disease dementia. We find that hippocampal thickness estimates detect known differences between clinical groups and can determine the location of these effects on the hippocampal sheet. Further, thickness estimates improve classification of clinical groups and cognitively unimpaired controls when added as an additional predictor. Comparable results are obtained with different datasets and segmentation algorithms. Taken together, we replicate canonical findings on hippocampal volume/shape changes in dementia, extend them by gaining insight into their spatial localization on the hippocampal sheet, and provide additional, complementary information beyond traditional measures. We provide a new set of sensitive processing and analysis tools for the analysis of hippocampal geometry that allows comparisons across studies without relying on image registration or requiring manual intervention

    Perceptual drifts of real and artificial limbs in the rubber hand illusion

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    Fuchs X, Riemer M, Diers M, Flor H, Trojan J. Perceptual drifts of real and artificial limbs in the rubber hand illusion. Scientific Reports. 2016;6(1): 24362

    The rubber hand illusion induced by visual-thermal stimulation

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    Trojan J, Fuchs X, Speth S-L, Diers M. The rubber hand illusion induced by visual-thermal stimulation. Scientific Reports. 2018;8(1): 12417.In the rubber hand illusion (RHI), synchronous touch of a real hand and an artificial hand leads to the feeling of the artificial hand belonging to one’s own body. This study examined whether the RHI can be induced using visual–thermal instead of visual–tactile stimulus patterns and to which extent the congruency between temperature and colour of the visual stimulus influences the RHI. In a within-subject design, we presented cold vs. warm thermal stimuli to the participants’ hidden hand combined with red vs. blue visual stimuli presented synchronously vs. asynchronously at a fake hand. The RHI could be induced using visual–thermal stimuli, yielding RHI vividness ratings comparable to the visual-tactile variant. Congruent (warm–red, cold–blue) synchronous stimulus patterns led to higher RHI vividness than incongruent (warm–blue, cold–red) synchronous combinations; in the asynchronous conditions, an inverse effect was present. Temperature ratings mainly depended on the actual stimulus temperature and were higher with synchronous vs. asynchronous patterns; they were also slightly higher with red vs. blue light, but there were no interactions with temperature or synchrony. In conclusion, we demonstrated that the RHI can be induced via visual-thermal stimuli, opening new perspectives in research on multi-sensory integration and body representations

    Automated Olfactory Bulb Segmentation on High Resolutional T2-Weighted MRI

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    The neuroimage analysis community has neglected the automated segmentation of the olfactory bulb (OB) despite its crucial role in olfactory function. The lack of an automatic processing method for the OB can be explained by its challenging properties. Nonetheless, recent advances in MRI acquisition techniques and resolution have allowed raters to generate more reliable manual annotations. Furthermore, the high accuracy of deep learning methods for solving semantic segmentation problems provides us with an option to reliably assess even small structures. In this work, we introduce a novel, fast, and fully automated deep learning pipeline to accurately segment OB tissue on sub-millimeter T2-weighted (T2w) whole-brain MR images. To this end, we designed a three-stage pipeline: (1) Localization of a region containing both OBs using FastSurferCNN, (2) Segmentation of OB tissue within the localized region through four independent AttFastSurferCNN - a novel deep learning architecture with a self-attention mechanism to improve modeling of contextual information, and (3) Ensemble of the predicted label maps. The OB pipeline exhibits high performance in terms of boundary delineation, OB localization, and volume estimation across a wide range of ages in 203 participants of the Rhineland Study. Moreover, it also generalizes to scans of an independent dataset never encountered during training, the Human Connectome Project (HCP), with different acquisition parameters and demographics, evaluated in 30 cases at the native 0.7mm HCP resolution, and the default 0.8mm pipeline resolution. We extensively validated our pipeline not only with respect to segmentation accuracy but also to known OB volume effects, where it can sensitively replicate age effects

    Do Mirror Glasses Have the Same Effect on Brain Activity as a Mirror Box? Evidence from a Functional Magnetic Resonance Imaging Study with Healthy Subjects

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    Milde C, Rance M, Kirsch P, et al. Do Mirror Glasses Have the Same Effect on Brain Activity as a Mirror Box? Evidence from a Functional Magnetic Resonance Imaging Study with Healthy Subjects. PLOS ONE. 2015;10(5): e0127694

    An augmented reality home-training system based on the mirror training and imagery approach

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    Trojan J, Diers M, Fuchs X, et al. An augmented reality home-training system based on the mirror training and imagery approach. Behavior Research Methods. 2013;46(3):634-640

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