7 research outputs found
Appendix A. Means and standard errors for seven defense-related traits of the 24 species of milkweed employed in this study.
Means and standard errors for seven defense-related traits of the 24 species of milkweed employed in this study
Appendix B. The three defense clusters separated in multivariate space.
The three defense clusters separated in multivariate space
Weitemier et al. Hyb-Seq for phylogenomics in plants
<p>Hyb-Seq data matrices used by Weitemier et al. for phylogenomic analyses of <em>Asclepias. </em> </p>
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<p>Weitemier_et_al_Asclepias_syriaca_single_copy_gene_exons.fasta contains the sequences of the targeted exons used for probe design. </p>
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<p>Weitemier_et_al_plastome.phy contains the whole plastome matrix.</p>
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<p>Weitemier_et_al_nuclear_concatenated.phy contains a concatenation of all 768 putatively single-copy gene matrices.</p>
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<p>Weitemier_et_al_nuclear_gene_matrices.tgz is a gzipped tarball of the 768 individual matrices for the putatively single-copy genes. Note that the exons of each gene are concatenated in no particular order.</p>
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<p>Weitemier_et_al_nuclear_concatenated.tre contains the best ML tree for the concatenation matrix with bootstrap support values.</p>
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<p>Weitemier_et_al_plastome.tre contains the best ML tree for the plastome matrix with bootstrap support values.</p>
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<p>Weitemier_et_al_nuclear_gene_trees.tgz contains the bootstrap trees from the ML analysis of each nuclear gene.</p>
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<p>Â Weitemier_et_al_MP-EST_species_tree.tre contains the MP-EST species tree with bootstrap values.</p