Additional file 2: of Identification and differential regulation of microRNAs during thyroid hormone-dependent metamorphosis in Microhyla fissipes

Figure S1. Morphological characteristics of M. fissipes tadpoles during natural metamorphosis. TOL: total length; TL: tail length; BW: body width; SL: snout length; IOS: interocular space; Pre-: premetamorphosis; Pro-: prometamorphosis; climax: the climax of metamorphosis; End: end of metamorphosis. (TIF 761 kb

Additional file 4: of Identification and differential regulation of microRNAs during thyroid hormone-dependent metamorphosis in Microhyla fissipes

Figure S2. a. Length distribution and abundance of small RNA sequences in M. fissipes, as determined by Illumina small-RNA deep sequencing. b. Nucleotides bias on the specific position of miRNAs in M. fissipes c. Count distribution and abundance of unique small RNA sequences in M. fissipes. d. Scatter plot map for miRNAs expression in the control and T3 groups. Each plot represented an individual miRNA, while the red plot indicated the significantly differentially expressed miRNA (p < 0.01 and |log2 (foldchange)| > 1). (JPG 1976 kb

Additional file 1: of Identification and differential regulation of microRNAs during thyroid hormone-dependent metamorphosis in Microhyla fissipes

Table S1. Primers sequences for qRT-PCR. (DOC 38 kb

Additional file 6: of Identification and differential regulation of microRNAs during thyroid hormone-dependent metamorphosis in Microhyla fissipes

Table S3. Conserved miRNAs in M. fissipes. (XLS 61 kb

Additional file 5: of Identification and differential regulation of microRNAs during thyroid hormone-dependent metamorphosis in Microhyla fissipes

Figure S3. Pie charts of different abundance of small RNA in control group and T3 treated group. (TIF 579 kb

Additional file 3: of Identification and differential regulation of microRNAs during thyroid hormone-dependent metamorphosis in Microhyla fissipes

Table S2. Overview of readcounts for sRNA-seq from the raw data to high quality reads, and quality filtering. (DOC 42 kb

Additional file 4: of Transcriptomics reveals the molecular processes of light-induced rapid darkening of the non-obligate cave dweller Oreolalax rhodostigmatus (Megophryidae, Anura) and their genetic basis of pigmentation strategy

Table S3. Summary of FPKM. (XLSX 20703 kb

Additional file 6: of Transcriptomics reveals the molecular processes of light-induced rapid darkening of the non-obligate cave dweller Oreolalax rhodostigmatus (Megophryidae, Anura) and their genetic basis of pigmentation strategy

Table S5. Summary of enrichment based on stricter light-inducible genes (213). (XLSX 32 kb

Additional file 1: of Transcriptomics reveals the molecular processes of light-induced rapid darkening of the non-obligate cave dweller Oreolalax rhodostigmatus (Megophryidae, Anura) and their genetic basis of pigmentation strategy

Table S1. Summary of sequencing quality. (XLSX 9 kb

Additional file 2: of Transcriptomics reveals the molecular processes of light-induced rapid darkening of the non-obligate cave dweller Oreolalax rhodostigmatus (Megophryidae, Anura) and their genetic basis of pigmentation strategy

Figure S1. Length distribution of transcripts and unigenes. (PDF 4 kb