2 research outputs found
Silver-Catalyzed C(sp<sup>3</sup>)–H Chlorination
A silver-catalyzed
chlorination of benzylic, tertiary, and secondary
C(sp<sup>3</sup>)–H bonds was developed. The reaction proceeded
with as low as 0.2 mol % catalyst loading at room temperature under
air atmosphere with synthetically useful functional group compatibility.
The regioselectivity and reactivity tendencies suggest that the chlorination
proceeded through a radical pathway, but an intermediate alkylsilver
species cannot be ruled out
Visualized and Quantitative Conformational Analysis of Peptidomimetics
Protein–protein
interactions (PPIs) are fundamentally important
and challenging drug targets. Peptidomimetic molecules of various
types have been developed to modulate PPIs. A particularly promising
drug discovery strategy, structural peptidomimetics, was designed
based on special mimicking of side-chain Cα–Cβ bonds. It is simple and versatile. Nevertheless, no
quantitative method has been established to evaluate its similarity
to a target peptide motif. We developed two methods that enable visual,
comprehensive, and quantitative analysis of peptidomimetics: peptide
conformation distribution (PCD) plot and peptidomimetic analysis (PMA)
map. These methods specifically examine multiple side-chain Cα–Cβ bonds of a peptide fragment
motif and their corresponding bonds (pseudo-Cα–Cβ bonds) in a mimetic molecule instead of φ and
ψ angles of a single amino acid in the traditional Ramachandran
plot. The PCD plot is an alignment-free method, whereas the PMA map
is an alignment-based method providing distinctive and complementary
analysis. Results obtained from analysis using these two methods indicate
our multifacial α-helix mimetic scaffold 12 as
an excellent peptidomimetic that can precisely mimic the spatial positioning
of side-chain functional groups of α-helix. These methods are
useful for visualized and quantified evaluation of peptidomimetics
and for the rational design of new mimetic scaffolds
