Additional file 9 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 9: Table S9. DEG associated with plant photosynthesis process in Yu17S seedlings in response to cold stress

Additional file 8 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 8: Table S8. KEGG Pathway analysis of the 9317 DEGs under cold (2–48 h) conditions and 24 h recovery stages in Yu17S seedlings

Additional file 1 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 1: Table S1. Summary of RNA-Seq reads and their mapping on the rice genome

Additional file 6 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 6: Table S6. GO analysis of all the upregulated DEGs under cold (2–48 h) conditions in Yu17S seedlings

Additional file 12 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 12: Table S12. DEG associated with osmotic adjustment in Yu17S seedlings in response to cold stress

Additional file 5 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 5: Table S5. GO analysis of the 9317 DEGs under cold (2–48 h) conditions and 24 h recovery stages in Yu17S seedlings. (XLS 127 kb

Additional file 11 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 11: Table S11. DEGs associated with phytohormone metabolism in Yu17S seedlings in response to cold stress

Additional file 2 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 2: Table S2. Primers and corresponding sequences used for quantitative RT-PCR analysis

Additional file 7 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 7: Table S7. GO analysis of all the upregulated and downregulated DEGs under 24 h recovery stages in Yu17S seedlings

Additional file 4 of Transcriptional and physiological data revealed cold tolerance in a photo-thermo sensitive genic male sterile line Yu17S

Additional file 4: Table S4. DEGs associated with transcription factor families in rice at all five time points