15 research outputs found
Table_1_Lockdown Policies, Economic Support, and Mental Health: Evidence From the COVID-19 Pandemic in United States.DOCX
During the COVID-19 pandemic, various lockdown policies were put in place by the governments in different countries and different levels, which effectively curbed the spread of the virus, but also cause substantial damage to the mental health of local residents. We use statistics provided by the Household Pulse Survey and OxCGRT between 23 April 2020 and 30 August 2021 to analyze the impact of lockdown on overall mental health levels in US states during the COVID-19 pandemic at the macro level. The results show that the lockdown policies implemented by the state governments lead to a deterioration in psychological conditions, and this relationship varies to some extent depending on the level of high-quality economic support, that the state governments implement to alleviate the symptoms of depression and anxiety associated with the lockdown. Therefore, we argue that although lockdown policies are necessary during the COVID-19 pandemic, further government efforts are needed to give high-quality economic and mental health support to mitigate the negative effects of lockdown on mental health.</p
Analysis of Stability of Transcription System in Octane Media by Molecular Dynamics Simulation
Enzymatic catalysis in nonaqueous
environments has many advantages
over that in aqueous solution. However, structural stability and flexibility
of enzymes restrict their applications in nonaqueous environments.
It was proposed that nonaqueous media decrease the flexibility of
enzymes, resulting in their reduced activity. There is little detailed
information to clarify the impact of nonaqueous solvents on the structure
and flexibility of enzymes at molecular level. In this work, by using
the molecular dynamics simulation technology, we placed an entire
transcription system in organic solvent to investigate the effects
of nonpolar solvent on an enzyme. A small transcription machine, T7
RNA polymerase (T7 RNAP), was used as model enzyme to conduct this
study. We constructed two models with the T7 RNAP complex solvated
in organic solvent. The first one is to solvate the T7 RNAP complex
in pure octane directly. Our observation shows that T7 RNAP suffers
serious structural deterioration in octane, especially in the active
site, that the original correct binding of the substrate was completely
destroyed. The structural deterioration may seriously affect the activity
of T7 RNAP. Another model was built by pulling the transcription system
from water into octane. It was observed that a small portion of water
with some ions was carried into the organic media and coated on the
surface of the complex. The water layer forms a microaqueous solution
environment that plays an important role in protecting the internal
structure of the transcription system. However, the flexibility of
some key residues was reduced in the simulation time. It is deduced
that a higher temperature is necessary to improve its activity in
nonaqueous solvents. Our results are in good agreement with those
reported in the literature. It is expected that our research could
provide valuable information for the application of enzymes in nonaqueous
environments
Discovery of Potent and Selective CB2 Agonists Utilizing a Function-Based Computational Screening Protocol
Nowadays, the identification of agonists and antagonists
represents
a great challenge in computer-aided drug design. In this work, we
developed a computational protocol enabling us to design/screen novel
chemicals that are likely to serve as selective CB2 agonists. The
principle of this protocol is that by calculating the ligand–residue
interaction profile (LRIP) of a ligand binding to a specific target,
the agonist–antagonist function of a compound is then able
to be determined after statistical analysis and free energy calculations.
This computational protocol was successfully applied in CB2 agonist
development starting from a lead compound, and a success rate of 70%
was achieved. The functions of the synthesized derivatives were determined
by in vitro functional assays. Moreover, the identified potent CB2
agonists and antagonists strongly interact with the key residues identified
using the already known potent CB2 agonists/antagonists. The analysis
of the interaction profile of compound 6, a potent agonist,
showed strong interactions with F2.61, I186, and F2.64, while compound 39, a potent antagonist, showed strong interactions with L17,
W6.48, V6.51, and C7.42. Still, some residues including V3.32, T3.33,
S7.39, F183, W5.43, and I3.29 are hotspots for both CB2 agonists and
antagonists. More significantly, we identified three hotspot residues
in the loop, including I186 for agonists, L17 for antagonists, and
F183 for both. These hotspot residues are typically not considered
in CB1/CB2 rational ligand design. In conclusion, LRIP is a useful
concept in rationally designing a compound to possess a certain function
Photoredox-Catalyzed Redox-Neutral Decarboxylative C–H Acylations of Coumarins with α‑Keto Acid
A novel and green photocatalytic strategy for the synthesis
of
C-4-acylated coumarins with α-keto acids and 3-nitrocoumarin
has been developed. This operationally simple protocol works under
mild reaction conditions, providing convenient access to 4-acyl coumarin
derivatives. The control experimental results showed that the nitro
radical produced by the cleavage of the C–N bond acts as an
electron acceptor to complete the photocatalytic cycle, achieving
a redox-neutral reaction
Visible-Light-Induced Regioselective Radical Oxo-Amination of Alkenes with O<sub>2</sub> as the Oxygen Source
An efficient and novel visible-light-induced
oxo-amination of terminal
alkenes for the construction of α-amino ketones with easily
accessible and green O2 as the oxygen source has been developed.
The transformation possesses the advantages of operational simplicity,
a broad substrate scope, high atom economy, and mild reaction conditions.
The mechanistic studies reveal that an energy transfer process probably
occurs in the initial stage, and the reaction proceeds via β-scission
of the alkoxyl radical species
Discovery of Potent and Selective CB2 Agonists Utilizing a Function-Based Computational Screening Protocol
Nowadays, the identification of agonists and antagonists
represents
a great challenge in computer-aided drug design. In this work, we
developed a computational protocol enabling us to design/screen novel
chemicals that are likely to serve as selective CB2 agonists. The
principle of this protocol is that by calculating the ligand–residue
interaction profile (LRIP) of a ligand binding to a specific target,
the agonist–antagonist function of a compound is then able
to be determined after statistical analysis and free energy calculations.
This computational protocol was successfully applied in CB2 agonist
development starting from a lead compound, and a success rate of 70%
was achieved. The functions of the synthesized derivatives were determined
by in vitro functional assays. Moreover, the identified potent CB2
agonists and antagonists strongly interact with the key residues identified
using the already known potent CB2 agonists/antagonists. The analysis
of the interaction profile of compound 6, a potent agonist,
showed strong interactions with F2.61, I186, and F2.64, while compound 39, a potent antagonist, showed strong interactions with L17,
W6.48, V6.51, and C7.42. Still, some residues including V3.32, T3.33,
S7.39, F183, W5.43, and I3.29 are hotspots for both CB2 agonists and
antagonists. More significantly, we identified three hotspot residues
in the loop, including I186 for agonists, L17 for antagonists, and
F183 for both. These hotspot residues are typically not considered
in CB1/CB2 rational ligand design. In conclusion, LRIP is a useful
concept in rationally designing a compound to possess a certain function
Integrative Analyses of Metabolomes and Transcriptomes Provide Insights into Flavonoid Variation in Grape Berries
Flavonoids in grapes contribute the
quality of the berry, but the
flavonoid diversity and the regulatory networks underlying the variation
require a further investigation. In this study, we integrated multi-omics
data to systematically explore the global metabolic and transcriptional
profiles in the skins and pulps of three grape cultivars. The results
revealed large-scale differences involved in the flavonoid metabolic
pathway. A total of 133 flavonoids, including flavone and flavone C-glycosides, were identified. Beyond the visible differences
of anthocyanins, there was large variation in other sub-branched flavonoids,
most of which were positively correlated with anthocyanins in grapes.
The expressions of most flavonoid biosynthetic genes and the major
regulators MYBA1 were strongly consistent with the
changes in flavonoids. Integrative analysis identified two novel transcription
factors (MYB24 and MADS5) and two
ubiquitin proteins (RHA2) as promising regulatory
candidates for flavonoid biosynthesis in grapes. Further verification
in various grape accessions indicated that five major genes including flavonol 3′5′-hydroxylase (F3′5′H), UDP-glucose:flavonoid 3-O-glycosyl-transferase, anthocyanin O-methyltransferase, acyltransferase (3AT), and glutathione S-transferase (GST4) controlled flavonoid variation in grape
berries. These findings provide valuable information for understanding
the mechanism of flavonoid biosynthesis in grape berries and the further
development of grape health products
Integrative Analyses of Metabolomes and Transcriptomes Provide Insights into Flavonoid Variation in Grape Berries
Flavonoids in grapes contribute the
quality of the berry, but the
flavonoid diversity and the regulatory networks underlying the variation
require a further investigation. In this study, we integrated multi-omics
data to systematically explore the global metabolic and transcriptional
profiles in the skins and pulps of three grape cultivars. The results
revealed large-scale differences involved in the flavonoid metabolic
pathway. A total of 133 flavonoids, including flavone and flavone C-glycosides, were identified. Beyond the visible differences
of anthocyanins, there was large variation in other sub-branched flavonoids,
most of which were positively correlated with anthocyanins in grapes.
The expressions of most flavonoid biosynthetic genes and the major
regulators MYBA1 were strongly consistent with the
changes in flavonoids. Integrative analysis identified two novel transcription
factors (MYB24 and MADS5) and two
ubiquitin proteins (RHA2) as promising regulatory
candidates for flavonoid biosynthesis in grapes. Further verification
in various grape accessions indicated that five major genes including flavonol 3′5′-hydroxylase (F3′5′H), UDP-glucose:flavonoid 3-O-glycosyl-transferase, anthocyanin O-methyltransferase, acyltransferase (3AT), and glutathione S-transferase (GST4) controlled flavonoid variation in grape
berries. These findings provide valuable information for understanding
the mechanism of flavonoid biosynthesis in grape berries and the further
development of grape health products
Integrative Analyses of Metabolomes and Transcriptomes Provide Insights into Flavonoid Variation in Grape Berries
Flavonoids in grapes contribute the
quality of the berry, but the
flavonoid diversity and the regulatory networks underlying the variation
require a further investigation. In this study, we integrated multi-omics
data to systematically explore the global metabolic and transcriptional
profiles in the skins and pulps of three grape cultivars. The results
revealed large-scale differences involved in the flavonoid metabolic
pathway. A total of 133 flavonoids, including flavone and flavone C-glycosides, were identified. Beyond the visible differences
of anthocyanins, there was large variation in other sub-branched flavonoids,
most of which were positively correlated with anthocyanins in grapes.
The expressions of most flavonoid biosynthetic genes and the major
regulators MYBA1 were strongly consistent with the
changes in flavonoids. Integrative analysis identified two novel transcription
factors (MYB24 and MADS5) and two
ubiquitin proteins (RHA2) as promising regulatory
candidates for flavonoid biosynthesis in grapes. Further verification
in various grape accessions indicated that five major genes including flavonol 3′5′-hydroxylase (F3′5′H), UDP-glucose:flavonoid 3-O-glycosyl-transferase, anthocyanin O-methyltransferase, acyltransferase (3AT), and glutathione S-transferase (GST4) controlled flavonoid variation in grape
berries. These findings provide valuable information for understanding
the mechanism of flavonoid biosynthesis in grape berries and the further
development of grape health products
Integrative Analyses of Metabolomes and Transcriptomes Provide Insights into Flavonoid Variation in Grape Berries
Flavonoids in grapes contribute the
quality of the berry, but the
flavonoid diversity and the regulatory networks underlying the variation
require a further investigation. In this study, we integrated multi-omics
data to systematically explore the global metabolic and transcriptional
profiles in the skins and pulps of three grape cultivars. The results
revealed large-scale differences involved in the flavonoid metabolic
pathway. A total of 133 flavonoids, including flavone and flavone C-glycosides, were identified. Beyond the visible differences
of anthocyanins, there was large variation in other sub-branched flavonoids,
most of which were positively correlated with anthocyanins in grapes.
The expressions of most flavonoid biosynthetic genes and the major
regulators MYBA1 were strongly consistent with the
changes in flavonoids. Integrative analysis identified two novel transcription
factors (MYB24 and MADS5) and two
ubiquitin proteins (RHA2) as promising regulatory
candidates for flavonoid biosynthesis in grapes. Further verification
in various grape accessions indicated that five major genes including flavonol 3′5′-hydroxylase (F3′5′H), UDP-glucose:flavonoid 3-O-glycosyl-transferase, anthocyanin O-methyltransferase, acyltransferase (3AT), and glutathione S-transferase (GST4) controlled flavonoid variation in grape
berries. These findings provide valuable information for understanding
the mechanism of flavonoid biosynthesis in grape berries and the further
development of grape health products
