6 research outputs found
DNA methylation heatmap constructed using unsupervised hierarchical Ward clustering of the 711 CpG sites with the greatest variance across the 68 tumor samples identified six distinct methylation clusters.
<p>DNA methylation heatmap constructed using unsupervised hierarchical Ward clustering of the 711 CpG sites with the greatest variance across the 68 tumor samples identified six distinct methylation clusters.</p
Kaplan-Meier survival curves depicting three year survival for each of the six clusters identified via unsupervised hierarchical cluster analysis.
<p>Kaplan-Meier survival curves depicting three year survival for each of the six clusters identified via unsupervised hierarchical cluster analysis.</p
Candidate enriched gene sets for differentially methylated genes associated with HPV status.
<p>Candidate enriched gene sets for differentially methylated genes associated with HPV status.</p
CpG sites with DNA methylation values significantly associated (Adjusted p<0.05) with HPV status of the tumor.
<p>Positive T-Values correspond with higher methylation in HPV(+) while negative T-Values correspond with higher methylation in HPV(−) tumors.</p
Clinical characteristics of the study participants (n = 68).
<p>Clinical characteristics of the study participants (n = 68).</p
Clinical characteristics of the six clusters identified via unsupervised hierarchical cluster analysis of DNA methylation values.
*<p>p<0.05 for difference between clusters.</p>a<p>Problem drinking defined: AUDIT>8 and drank in past 1 year. Note: n = 14 missing AUDIT score.</p
