17 research outputs found
Role of Thermal History and Entanglement Related Thickness Selection in Polymer Crystallization
Using
molecular dynamics simulations and primitive path analysis,
we show that hot entangled polymer melts can crystallize faster with
higher crystallinities and larger crystalline stem lengths, as compared
to cold melts under rapid quenching conditions or during cold-crystallization.
This counterintuitive phenomenon similar to the so-called Mpemba effect
observed for water can be explained by the temperature dependence
of entanglements. Our results demonstrate the key role of the entanglement
state for crystallization properties and provide a new approach to
understand the role of thermal history and to the open question of
thickness selection in polymer crystallization
Cononsolvency Effect: When the Hydrogen Bonding between a Polymer and a Cosolvent Matters
Despite
the fact that the observation of cononsolvency was reported
as early as four decades ago, its phase-transition mechanism is still
under debate. In this work, we provided a comprehensive study of the
phase behaviors of poly(N-isopropylacrylamide) (PNiPAAm)
in sulfoxide or sulfone aqueous solutions. We observed a sharp collapse
transition of PNiPAAm brushes in sulfoxide but not in sulfone aqueous
solutions by equilibrium measurements of in situ spectroscopic ellipsometry.
We found that the hydrogen-bond formation between sulfoxide oxygens
and amide hydrogens of the polymer chains plays a critical role in
regulating the cononsolvency of PNiPAAm. We have extended the concept
of preferential adsorption by taking into account hydrophobic interactions
between cosolvent molecules, which are adsorbed on the polymer by
hydrogen bonds. This can explain the experimental observations of
PNiPAAm brushes in these solvent mixtures and sheds light on understanding
the phase behaviors of polymer solutions where hydrogen bonds and
hydrophobic interaction play a critical role. Our results can also
be of interest for the liquid–liquid phase separation in the
living cell where the condensation of proteins bound to large biomacromolecules
plays an essential role
Multicore Unimolecular Structure Formation in Single Dendritic–Linear Copolymers under Selective Solvent Conditions
The
conformational and thermodynamic properties of single dendritic–linear
copolymers are investigated by analytical models and computer simulations.
Applying poor solvent conditions on the dendritic part, these molecules
are known to form single unimolecular micelle-like structures. A mean-field
model applying the Daoud–Cotton approach and a surface tension
argument is presented and suggests the splitting of the unimolecular
single-core structure into a multicore structure with increasing dendrimers
generation and decreasing solvent selectivity. Monte Carlo simulations
utilizing the bond fluctuation model with explicit solvent are performed
which show the formation of multicore structures for trifunctional
codendrimers of different generations and spacer lengths with linear
chains attached to the terminal groups. These findings are aimed to
understand the physics of spontaneous self-assembly of codendrimers
in various well-defined macro-conformations under change of environmental
conditions with potential applications such as drug delivery systems
Inclusion Free Energy of Nanoparticles in Polymer Brushes
Using molecular dynamics simulations, the forces acting
on nanoparticles
inside polymer brushes are computed. Vertical force profiles are obtained
under variation of grafting density, nanoparticle (NP) size, solvent
quality, and degree of polydispersity. The force profiles are integrated
to obtain the inclusion free energies. If the NP size is fixed, this
energy scales with the osmotic pressure, consistent with current theoretical
models. These models also predict a scaling of the free energy proportional
to the volume of the NP, which is verified in good solvent and at
high densities. Otherwise, the power exponent remains lower, and surface
tension as a possible cause for the observed deviation is discussed.
Polydispersity is shown to reduce the inclusion free energy, while
the power law scaling as a function of NP size remains unchanged.
Finally, polymer brushes in Θ-solvent are shown to violate simple
scaling predictions within the density regime covered in this work.
Using a Flory–Huggins mean-field model, we demonstrate that
the universal scaling regime is restricted to very low grafting densities
below σ = 0.01, and the observed deviations are a result of
higher order contributions to the virial expansion of the osmotic
pressure
Thermal Tunneling of Homopolymers through Amphiphilic Membranes
We propose a theory
to predict the passive translocation of flexible
polymers through amphiphilic membranes. By using a generic model for
the potential felt by a monomer across the membrane we calculate the
free energy profile for homopolymers as a function of their hydrophobicity.
Our model explains the translocation window and the translocation
rates as a function of chain hydrophobicity in quantitative agreement
with simulation results. The potential model leads to a new adsorption
transition where chains switch from a one-sided bound adsorbed state
into a bridging state through the membrane core by increasing the
hydrophobicity beyond a critical value. We demonstrate that the hydrophobicity
leading to the fastest translocation coincides with the solution for
the critical point of adsorption in the limit of long chains
Nanoparticles of Various Degrees of Hydrophobicity Interacting with Lipid Membranes
Using
coarse-grained molecular dynamics simulations, we study the
passive translocation of nanoparticles with a size of about 1 nm and
with tunable degrees of hydrophobicity through lipid bilayer membranes.
We observe a window of translocation with a sharp maximum for nanoparticles
having a hydrophobicity in between hydrophilic and hydrophobic. Passive
translocation can be identified as diffusive motion of individual
particles in a free energy landscape. By combining direct sampling
with umbrella-sampling techniques we calculate the free energy landscape
for nanoparticles covering a wide range of hydrophobicities. We show
that the directly observed translocation rate of the nanoparticles
can be mapped to the mean-escape-rate through the calculated free
energy landscape, and the maximum of translocation can be related
with the maximally flat free energy landscape. The limiting factor
for the translocation rate of nanoparticles having an optimal hydrophobicity
can be related with a trapping of the particles in the surface region
of the membrane. Here, hydrophobic contacts can be formed but the
free energy effort of insertion into the brush-like tail regions can
still be avoided. The latter forms a remaining barrier of a few <i>k</i><sub>B</sub><i>T</i> and can be spontaneously
surmounted. We further investigate cooperative effects of a larger
number of nanoparticles and their impact on the membrane properties
such as solvent permeability, area per lipid, and the orientation
order of the tails. By calculating the partition of nanoparticles
at the phase boundary between water and oil, we map the microscopic
parameter of nanoparticle hydrophobicity to an experimentally accessibly
partition coefficient. Our studies reveal a generic mechanism for
spherical nanoparticles to overcome biological membrane-barriers without
the need of biologically activated processes
Nanoparticles of Various Degrees of Hydrophobicity Interacting with Lipid Membranes
Using
coarse-grained molecular dynamics simulations, we study the
passive translocation of nanoparticles with a size of about 1 nm and
with tunable degrees of hydrophobicity through lipid bilayer membranes.
We observe a window of translocation with a sharp maximum for nanoparticles
having a hydrophobicity in between hydrophilic and hydrophobic. Passive
translocation can be identified as diffusive motion of individual
particles in a free energy landscape. By combining direct sampling
with umbrella-sampling techniques we calculate the free energy landscape
for nanoparticles covering a wide range of hydrophobicities. We show
that the directly observed translocation rate of the nanoparticles
can be mapped to the mean-escape-rate through the calculated free
energy landscape, and the maximum of translocation can be related
with the maximally flat free energy landscape. The limiting factor
for the translocation rate of nanoparticles having an optimal hydrophobicity
can be related with a trapping of the particles in the surface region
of the membrane. Here, hydrophobic contacts can be formed but the
free energy effort of insertion into the brush-like tail regions can
still be avoided. The latter forms a remaining barrier of a few <i>k</i><sub>B</sub><i>T</i> and can be spontaneously
surmounted. We further investigate cooperative effects of a larger
number of nanoparticles and their impact on the membrane properties
such as solvent permeability, area per lipid, and the orientation
order of the tails. By calculating the partition of nanoparticles
at the phase boundary between water and oil, we map the microscopic
parameter of nanoparticle hydrophobicity to an experimentally accessibly
partition coefficient. Our studies reveal a generic mechanism for
spherical nanoparticles to overcome biological membrane-barriers without
the need of biologically activated processes
Nanoparticles of Various Degrees of Hydrophobicity Interacting with Lipid Membranes
Using
coarse-grained molecular dynamics simulations, we study the
passive translocation of nanoparticles with a size of about 1 nm and
with tunable degrees of hydrophobicity through lipid bilayer membranes.
We observe a window of translocation with a sharp maximum for nanoparticles
having a hydrophobicity in between hydrophilic and hydrophobic. Passive
translocation can be identified as diffusive motion of individual
particles in a free energy landscape. By combining direct sampling
with umbrella-sampling techniques we calculate the free energy landscape
for nanoparticles covering a wide range of hydrophobicities. We show
that the directly observed translocation rate of the nanoparticles
can be mapped to the mean-escape-rate through the calculated free
energy landscape, and the maximum of translocation can be related
with the maximally flat free energy landscape. The limiting factor
for the translocation rate of nanoparticles having an optimal hydrophobicity
can be related with a trapping of the particles in the surface region
of the membrane. Here, hydrophobic contacts can be formed but the
free energy effort of insertion into the brush-like tail regions can
still be avoided. The latter forms a remaining barrier of a few <i>k</i><sub>B</sub><i>T</i> and can be spontaneously
surmounted. We further investigate cooperative effects of a larger
number of nanoparticles and their impact on the membrane properties
such as solvent permeability, area per lipid, and the orientation
order of the tails. By calculating the partition of nanoparticles
at the phase boundary between water and oil, we map the microscopic
parameter of nanoparticle hydrophobicity to an experimentally accessibly
partition coefficient. Our studies reveal a generic mechanism for
spherical nanoparticles to overcome biological membrane-barriers without
the need of biologically activated processes
How do immobilised cell-adhesive Arg–Gly–Asp-containing peptides behave at the PAA brush surface?
<p>Bio-engineered surfaces that aim to induce normal cell behaviour <i>in vitro</i> need to ‘mimic’ the extracellular matrix in a way that allows cell adhesion. In this computational work, several model cell-binding peptides with a minimal cell-adhesive Arg–Gly–Asp sequence are investigated in the bulk as well as immobilised on a soft surface. For this reason, a combination of density functional theory and all-atom MD simulations is applied. The major goal of the modelling is to characterise the accessibility of the cell-recognition motif on the functionalised soft polymer surface. As a reference system, the behaviour of three peptide sequences is preliminarily studied in explicit water simulations. From the analysis of the MD trajectories, the solvent accessible surface area, the distribution of water molecules around peptide groups, the secondary structure and the thermodynamics of hydration are evaluated. Furthermore, each peptide is immobilised on the surface of a homopolymer poly(acrylic acid) brush. During MD simulations, all three peptides approach closely toward PAA brush, and their surface accessibility is characterised. Although the peptides are adsorbed onto the brush, they are not hidden by the polymer strands, with RGD unit accessible on the surface and available for guided cell adhesion.</p