Additional file 5; of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Table S5. All the identified DEGs in this study. Gene_id: gene ID number; TAIR10: gene ID in Arabidosis corresponding to the degs in eggplant; E-value: The lowest E-value of Blast-nr for each genes; FPKM: FPKM value of this gene; Means-0 h:mean expression (FPKM) of 0 h group; log2Ratio(s2/s1): Log2(folds of mean expression in two groups); Probability:Probability of difference; Blast nr: NR annotation. (XLS 1400 kb

Additional file 3: of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Table S3. All the assembled genes in this project. Gene_id: gene ID number; FPKM: FPKM value of this gene; the differentially expressed genes (DEGs) were annotated by overstriking. (XLS 5248 kb

Additional file 4: of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Table S4. Correlation value between each two samples. (XLS 25 kb

Additional file 8: of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Table S6 The 869 DEGs identified in both this study and the previous study [35]. (XLS 636 kb

Additional file 10: of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Table S7 KEGG pathway enrichment analysis of the 869 DEGs. (DOCX 40 kb

Additional file 9: of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Figure S3. GO categories assigned to the 869 DEGs. The left y-axis shows the percentages of proteins identified, and the right y-axis shows the protein number. The proteins were categorized according to the annotation of GO, and the number of each category is displayed based on biological process, cellular components, and molecular functions. (DOCX 798 kb

Additional file 6: of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Figure S1. Correlation analysis of the RNA-seq data and qRT-PCR result. Correlation analysis showed correlation between RNA-seq data and qRT-PCR was good (Pearson R > 0.9). The left y-axis indicates the corresponding expression data of RNA-seq (black lines). The right y-axis shows the relative gene expression levels detected by qRT-PCR (red lines). The x-axis shows the length of time (h) the eggplant peel was exposed to light. (DOCX 1112 kb

Additional file 7: of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Figure S2. Cluster analysis of DEGs with significant expression profile changes. All the DEGs were subjected to complete-linkage hierarchical clustering using a Euclidean distance metric and divided into 26 clusters. The x-axis showed the time point to time point comparison. The y-axis shows the relative log2(ratio) of each comparison. (DOCX 1568 kb

Additional file 2: of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Table S2. Summary statistics of sequencing and assembly. (DOCX 28 kb

Additional file 1: of Transcriptome profiling of genes related to light-induced anthocyanin biosynthesis in eggplant (Solanum melongena L.) before purple color becomes evident

Table S1. List of primers sequences used in this study. (DOCX 33 kb