26 research outputs found
Technetium Complexes for the Quantitation of Brain Amyloid
Technetium Complexes for the Quantitation of
Brain Amyloi
Technetium Complexes for the Quantitation of Brain Amyloid
Technetium Complexes for the Quantitation of
Brain Amyloi
β-Azidoalanine as an IR Probe: Application to Amyloid Aβ(16-22) Aggregation
β-Azidoalanine dipeptide 1 was synthesized, and its azido stretching vibration in H2O and dimethyl sulfoxide (DMSO) was studied by using Fourier transform (FT) IR spectroscopy. The dipole strength of the azido stretch mode is found to be about 19 and 5 times larger than those of the CN and SCN stretch modes, respectively, which have been used as local environmental IR sensors. The azido stretch band in H2O is blue-shifted by about 14 cm−1 in comparison to that in DMSO, indicative of its sensitivity to the electrostatic environment. To test the utility of β-azidoalanine as an IR probe of the local electrostatic environment in proteins, azidopeptide 4 was prepared by its incorporation into Aβ(16-22) peptide of the Alzheimer’s disease amyloid β-protein at position Ala21. The amide I IR spectrum of 4 in D2O suggests that the azidopeptide thus modified forms in-register β-sheets in aggregates as observed for normal Aβ(16-22). The azido peak frequency of 4 in aggregates is almost identical to that in DMSO, indicating that the azido group is not exposed to water but to the hydrophobic environment. We believe that β-azidoalanine will be used as an effective IR probe for providing site-specific information about the local electrostatic environments of proteins
TfNN<sup>15</sup>N: A γ-<sup>15</sup>N‑Labeled Diazo-Transfer Reagent for the Synthesis of β-<sup>15</sup>N‑Labeled Azides
Azides are infrared
(IR) probes that are important for structure
and dynamics studies of proteins. However, they often display complex
IR spectra owing to Fermi resonances and multiple conformers. Isotopic
substitution of azides weakens the Fermi resonance, allowing more
accurate IR spectral analysis. Site-specifically 15N-labeled
aromatic azides, but not aliphatic azides, are synthesized through
nitrosation. Both 15N-labeled aromatic and aliphatic azides
are synthesized through nucleophilic substitution or diazo-transfer
reaction but as an isotopomeric mixture. We present the synthesis
of TfNN15N, a γ-15N-labeled diazo-transfer
reagent, and its use to prepare β-15N-labeled aliphatic
as well as aromatic azides
Osmium Tetroxide Anchored to Porous Resins Bearing Residual Vinyl Groups: A Highly Active and Recyclable Solid for Asymmetric Dihydroxylation of Olefins
OsO4 was simply immobilized onto resins such as Amberlite XAD-4 or XAD-7 bearing residual vinyl groups. The resulting osmylated resins
are air-stable, nonvolatile, and much easier to handle than their homogeneous counterpart (OsO4). Moreover, the resin-bound OsO4 exhibited
excellent catalytic activity in the asymmetric dihydroxylation of olefins and was easily recovered and reused in five consecutive reactions
without any significant decrease in product yield. Turnover time, however, was significantly increased for the fourth and fifth reactions
Site-Specific Hydrogen-Bonding Interaction between <i>N</i>-Acetylproline Amide and Protic Solvent Molecules: Comparisons of IR and VCD Measurements with MD Simulations
The effects of solute−solvent interactions on solution structures of small peptides have been paid a great
deal of attention. To study the effect of hydrogen-bonding interactions on peptide solution structures, we
measured the amide I IR and VCD spectra of N-acetylproline amide (AP) in various protic solvents, i.e.,
D2O, MeOD, EtOD, and PrOD, and directly compared them with theoretically simulated ones. The numbers
of protic solvent molecules hydrogen-bonded to the two peptide bonds in the AP were quantitatively determined
by carrying out the molecular dynamics (MD) simulations and then compared with the spectral analyses of
the experimentally measured amide I bands. The two peptides in the AP have different propensities of forming
H-bonds with protic solvent molecules, and the H-bond population distribution is found to be strongly site-specific and solvent-dependent. However, it is found that adoption of the polyproline II (PII) conformation by
AP in protic solvents does not strongly depend on the hydrogen bond network-forming ability of protic solvents
nor on the solvent polarity. We present a brief discussion on the validity as well as limitation of the currently
available force field parameters used for the present MD simulation study
Efficient and Inexpensive Synthesis of <sup>15</sup>N‑Labeled 2‑Azido-1,3-dimethylimidazolinium Salts Using Na<sup>15</sup>NO<sub>2</sub> Instead of Na<sup>15</sup>NNN
15N-Labeled
azides are important probes for infrared
and magnetic resonance spectroscopy and imaging. They can be synthesized
by reaction of primary amines with a 15N-labeled diazo-transfer
reagent. We present the synthesis of 15N-labeled 2-azido-1,3-dimethylimidazolinium
salts 1 as a 15N-labeled diazo-transfer reagent.
Nitrosation of 1,3-dimethylimidazolinium-2-yl hydrazine (2) with Na15NO2 under acidic conditions gave 1 as a 1:1 mixture of α- and γ-15N-labeled
azides, α- and γ-1, rather than γ-1 alone. The isotopomeric mixture thus obtained was then subjected
to the diazo-transfer reaction with primary amines 3 to
afford azides 4 as a 1:1 mixture of β-15N-labeled azides β-4 and unlabeled ones 4′. The efficient and inexpensive synthesis of 1 as a 1:1 mixture of α- and γ-1 using
Na15NO2 instead of Na15NNN facilitates
their wide use as a 15N-labeled diazo-transfer reagent
for preparing 15N-labeled azides as molecular probes
Isonitrile as an Ultrasensitive Infrared Reporter of Hydrogen-Bonding Structure and Dynamics
Infrared (IR) probes based on terminally
blocked β-isocyanoalanine
(AlaNC) and <i>p</i>-isocyanophenylalanine (PheNC) amino
acids were synthesized. These isonitrile (NC)-derivatized compounds
were extensively characterized by FTIR and femtosecond IR pump–probe
spectroscopies, and a direct comparison was made with popularly used
nitrile (CN)- and azide (N<sub>3</sub>)-derivatized analogs. It is
shown that the isonitrile stretch frequency exhibits extremely high
sensitivity to hydrogen-bonding interactions. In addition, the IR
intensity of the isonitrile group is much higher than that of the
nitrile group and almost as intense as that of the azido group. Furthermore,
its vibrational lifetime is much longer than that of the nitrile and
azido groups. To elucidate the origin of such a high H-bond sensitivity
and IR intensity observed for isonitrile, extensive quantum chemical
calculations were performed. It is shown that the Coulombic contributions
to the vibrational frequency shifts of the isonitrile and nitrile
stretch modes have opposite signs but similar magnitudes, whereas
the contributions of exchange repulsion and charge delocalization
to their frequency shifts are comparable. Therefore, the isonitrile
stretch frequency is much more sensitive to H-bonding interactions
because the blue-shifting exchange-repulsion effects are additionally
enforced by such electrostatic effects. It is also shown that the
much higher IR intensity of the isonitrile group compared to that
of the nitrile group is due to the configuration reversal of the atomic
electronegativity between the NC and CN groups. Owing to these features,
we believe that isonitrile is a much better IR reporter of H-bonding
structure and dynamics than the widely used nitrile and azide
Site-selective Intramolecular Hydrogen-Bonding Interactions in Phosphorylated Serine and Threonine Dipeptides
To study the phosphorylation effect on the peptide conformation, we carried out nuclear magnetic resonance (NMR), circular dichroism (CD), Fourier transform (FT)-IR, and vibrational circular dichroism (VCD) experiments with serine and threonine dipeptides (SD and TD) and their phosphorylated ones (pSD and pTD). It is found that both unphosphorylated and phosphorylated serine and threonine dipeptides adopt two conformations, polyproline II (PII) and β-strand. The pH-dependent NMR study shows that the side-chain dianionic phosphoryl group can form direct intramolecular hydrogen bonds with the backbone amide protons at both the acetyl and amide ends of pTD, but only at the acetyl end of pSD. Temperature- and pH-dependent CD studies reveal that, unlike pSD, pTD undergoes conformational transition from PII to β-strand upon double ionization of the phosphoryl group. The subtle but distinct differences between pTD and pSD in site-selective intramolecular hydrogen-bonding interaction and charge-dependent conformational transition may sometimes become significant when choosing between serine and threonine for the conformational control of peptides and proteins by phosphorylation
Switching Regioselectivity in Crossed Acyloin Condensations between Aromatic Aldehydes and Acetaldehyde by Altering <i>N</i>-Heterocyclic Carbene Catalysts
An unprecedented high level of regioselectivities (up to 96%) in the intermolecular crossed acyloin condensations of various aromatic aldehydes with acetaldehyde was realized by an appropriate choice of N-heterocyclic carbene catalysts
