Size-Independent Energy Transfer in Biomimetic Nanoring Complexes

Supramolecular antenna-ring complexes are of great interest due to their presence in natural light-harvesting complexes. While such systems are known to provide benefits through robust and efficient energy funneling, the relationship between molecular structure, strain (governed by nuclear coordinates and motion), and energy dynamics (arising from electronic behavior) is highly complex. We present a synthetic antenna-nanoring system based on a series of conjugated porphyrin chromophores ideally suited to explore such effects. By systematically varying the size of the acceptor nanoring, we reveal the interplay between antenna-nanoring binding, local strain, and energy dynamics on the picosecond time scale. Binding of the antenna unit creates a local strain in the nanoring, and this strain was measured as a function of the size of the nanoring, by UV–vis-NIR titration, providing information on the conformational flexibility of the system. Strikingly, the energy-transfer rate is independent of nanoring size, indicating the existence of strain-localized acceptor states, spread over about six porphyrin units, arising from the noncovalent antenna-nanoring association

Self-Assembly of Linear Porphyrin Oligomers into Well-Defined Aggregates

Conjugated zinc porphyrin oligomers of various lengths are shown to form well-defined planar aggregates at low temperatures. The aggregation occurs over a narrow temperature interval (170–150 K) and is accompanied by dramatic changes in the electronic absorption and emission spectra. Similar changes are found in J-aggregates in which the transition dipole moments of aggregated chromophores couple to form a new and intense transition in the absorption spectrum, red shifted from the monomeric chromophore band. For the present porphyrin oligomers, the dramatic absorption changes are not associated with the formation of large aggregates, but rather with the dimerization accompanied by planarization of the oligomers. Free oligomers have a broad distribution of porphyrin–porphyrin dihedral angles and show a broad and unstructured absorption spectrum. As the oligomers stack to form aggregates, they planarize and the width of the conformational distribution is reduced to include virtually only the planar conformers, resulting in the observed change of the absorption spectrum. No experimental evidence for the formation of large aggregates was found, while a small aggregate, probably only dimer, is supported by the minor changes of the fluorescence rate constant upon aggregation and the fact that pyridine has no significant effect on the formation of this aggregate, which otherwise is very effective for inhibiting aggregation of zinc porphyrin oligomers. Compared to most porphyrin aggregates, which show broad absorption spectra and quenched fluorescence, these aggregates give sharp absorption and emission spectra with little change in the fluorescence quantum yield. Similar aggregates were also observed for oligomers substituted with both a fullerene electron acceptor and a ferrocene donor. The results presented here will be potentially useful as tools to understand how electron transfer and delocalization processes are influenced by molecular order/disorder transitions

A Discrete Three-Layer Stack Aggregate of a Linear Porphyrin Tetramer: Solution-Phase Structure Elucidation by NMR and X‑ray Scattering

Formation of stacked aggregates can dramatically alter the properties of aromatic π-systems, yet the solution-phase structure elucidation of these aggregates is often impossible because broad distributions of species are formed, giving uninformative spectroscopic data. Here, we show that a butadiyne-linked zinc porphyrin tetramer forms a remarkably well-defined aggregate, consisting of exactly three molecules, in a parallel stacked arrangement (in chloroform at room temperature; concentration 1 mM–0.1 μM). The aggregate has a mass of 14.7 kDa. Unlike most previously reported aggregates, it gives sharp NMR resonances and aggregation is in slow exchange on the NMR time scale. The structure was elucidated using a range of NMR techniques, including diffusion-editing, ¹H–²⁹Si HMBC, ¹H–¹H COSY, TOCSY and NOESY, and ¹H–¹³C edited HSQC spectroscopy. Surprisingly, the ¹H–¹H COSY spectrum revealed many long-range residual dipolar couplings (RDCs), and detailed analysis of magnetic field-induced ¹H–¹³C RDCs provided further evidence for the structural model. The size and shape of the aggregate is supported by small-angle X-ray scattering (SAXS) data. It adopts a geometry that maximizes van der Waals contact between the porphyrins, while avoiding clashes between side chains. The need for interdigitation of the side chains prevents formation of stacks consisting of more than three layers. Although a detailed analysis has only been carried out for one compound (the tetramer), comparison with the NMR spectra of other oligomers indicates that they form similar three-layer stacks. In all cases, aggregation can be prevented by addition of pyridine, although at low pyridine concentrations, disaggregation takes many hours to reach equilibrium

Polyyne Rotaxanes: Stabilization by Encapsulation

Active metal template Glaser coupling has been used to synthesize a series of rotaxanes consisting of a polyyne, with up to 24 contiguous <i>sp-</i>hybridized carbon atoms, threaded through a variety of macrocycles. Cadiot–Chodkiewicz cross-coupling affords higher yields of rotaxanes than homocoupling. This methodology has been used to prepare [3]­rotaxanes with two polyyne chains locked through the same macrocycle. The crystal structure of one of these [3]­rotaxanes shows that there is extremely close contact between the central carbon atoms of the threaded hexayne chains (C···C distance 3.29 Å vs 3.4 Å for the sum of van der Waals radii) and that the bond-length-alternation is perturbed in the vicinity of this contact. However, despite the close interaction between the hexayne chains, the [3]­rotaxane is remarkably stable under ambient conditions, probably because the two polyynes adopt a crossed geometry. In the solid state, the angle between the two polyyne chains is 74°, and this crossed geometry appears to be dictated by the bulk of the “supertrityl” end groups. Several rotaxanes have been synthesized to explore gem-dibromoethene moieties as “masked” polyynes. However, the reductive Fritsch–Buttenberg–Wiechell rearrangement to form the desired polyyne rotaxanes has not yet been achieved. X-ray crystallographic analysis on six [2]­rotaxanes and two [3]­rotaxanes provides insight into the noncovalent interactions in these systems. Differential scanning calorimetry (DSC) reveals that the longer polyyne rotaxanes (C16, C18, and C24) decompose at higher temperatures than the corresponding unthreaded polyyne axles. The stability enhancement increases as the polyyne becomes longer, reaching 60 °C in the C24 rotaxane

Synthesis of Polyyne Rotaxanes

Active-metal templating has been used to synthesize rotaxanes consisting of a phenanthroline-based macrocycle threaded around a C8, C12, or C20 polyyne chain. The crystal structure of the C12 rotaxane has been determined. In the rhenium(I) carbonyl complex of this rotaxane, with Re(CO)₃Cl coordinated to the phenanthroline macrocycle, the proximity of the polyyne chain quenches the luminescence of the rhenium. These rotaxanes offer a new approach to controlling the environment and interactions of a polyyne chain

Synthesis of Polyyne Rotaxanes

Active-metal templating has been used to synthesize rotaxanes consisting of a phenanthroline-based macrocycle threaded around a C8, C12, or C20 polyyne chain. The crystal structure of the C12 rotaxane has been determined. In the rhenium(I) carbonyl complex of this rotaxane, with Re(CO)₃Cl coordinated to the phenanthroline macrocycle, the proximity of the polyyne chain quenches the luminescence of the rhenium. These rotaxanes offer a new approach to controlling the environment and interactions of a polyyne chain

Photophysics of Threaded sp-Carbon Chains: The Polyyne is a Sink for Singlet and Triplet Excitation

We have used single-crystal X-ray diffraction and time-resolved UV–NIR–IR absorption spectroscopy to gain insights into the structures and excited-state dynamics of a rotaxane consisting of a hexayne chain threaded through a phenanthroline macrocycle and a family of related compounds, including the rhenium­(I) chlorocarbonyl complex of this rotaxane. The hexayne unit in the rhenium-rotaxane is severely nonlinear; it is bent into an arc with an angle of 155.6(1)° between the terminal C1 and C12 atoms and the centroid of the central C–C bond, with the most acute distortion at the point where the polyyne chain pushes against the Re­(CO)₃Cl unit. There are strong through-space excited-state interactions between the components of the rotaxanes. In the metal-free rotaxane, there is rapid singlet excitation energy transfer (EET) from the macrocycle to the hexayne (τ = 3.0 ps), whereas in the rhenium-rotaxane there is triplet EET, from the macrocycle complex ³MLCT state to the hexayne (τ = 1.5 ns). This study revealed detailed information on the short-lived higher excited state of the hexayne (lifetime ∼1 ps) and on structural reorganization and cooling of hot polyyne chains, following internal conversion (over ∼5 ps). Comparison of the observed IR bands of the excited states of the hexayne with results from time-dependent density functional calculations (TD DFT) shows that these excited states have high cumulenic character (low bond length alternation) around the central region of the chain. These findings shed light on the complex interactions between the components of this supramolecular rotaxane and are important for the development of materials for the emerging molecular and nanoscale electronics

Resonance Raman Investigation of β‑Cyclodextrin-Encapsulated π‑Conjugated Polymers

Resonance Raman (RR) spectroscopy is used to investigate the effect of β-cyclodextrin encapsulation on the structural and photophysical properties of poly­(4,4′-diphenylenevinylene). We especially focus on the thermal stability of the polymer. We find that within the range of 10–55 °C the uninsulated polymer exhibits decreased Raman intensity in all the vibrational bands with temperature, along with changes in the relative intensity of the C–C inter-ring stretch mode at 1270 cm^–1 with respect to the ring C–H in-plane symmetric bend at 1187 cm^–1, which provides evidence for conformational changes as a function of temperature. No changes are observed in the intensity of the in-phase CH out-of-plane wag of the vinylene group at 968 cm^–1. Therefore, the conformational changes involve mainly dihedral angle modification between the adjacent phenyl rings toward planarization, and little or no change in the planarity of the <i>trans</i>-vinylene group. The decrease of the optical absorption at 55 °C with respect to that at room temperature and the appearance of a new absorption band at lower energies explain the decrease in the RR intensities and the wavelength dependence of the relative intensities of the Raman band. We note that the conformational change into a more planar geometry, which affects a significant portion of the polymer population, is irreversible and consistent with thermally induced aggregation. Such a planarization is unexpected in view of the usually observed thermochromic behavior of conjugated polymers, which leads to an increase of the energy gap for increasing temperature, as the average dihedral angles are increased due to excitation of a larger number of vibrational modes. Interestingly, the higher threading ratio polymers are resistant to any conformational changes within this temperature range, as reflected by their unchanged RR spectra, due to the rotaxane’s ability to suppress intermolecular interactions and aggregation. Interestingly, the conformation of the uninsulated polymer at room temperature appears to be the same as that in the threaded analogues, which suggests that the cyclodextrin cavity hosts the polymer without physically interacting with it

Distance Measurement of a Noncovalently Bound Y@C₈₂ Pair with Double Electron Electron Resonance Spectroscopy

Paramagnetic endohedral fullerenes with long spin coherence times, such as N@C₆₀ and Y@C₈₂, are being explored as potential spin quantum bits (qubits). Their use for quantum information processing requires a way to hold them in fixed spatial arrangements. Here we report the synthesis of a porphyrin-based two-site receptor <b>1</b>, offering a rigid structure that binds spin-active fullerenes (Y@C₈₂) at a center-to-center distance of 5.0 nm, predicted from molecular simulations. The spin–spin dipolar coupling was measured with the pulsed EPR spectroscopy technique of double electron electron resonance and analyzed to give a distance of 4.87 nm with a small distribution of distances

Mechanical Stiffening of Porphyrin Nanorings through Supramolecular Columnar Stacking

Solvent-induced aggregates of nanoring cyclic polymers may be transferred by electrospray deposition to a surface where they adsorb as three-dimensional columnar stacks. The observed stack height varies from single rings to four stacked rings with a layer spacing of 0.32 ± 0.04 nm as measured using scanning tunneling microscopy. The flexibility of the nanorings results in distortions from a circular shape, and we show, through a comparison with Monte Carlo simulations, that the bending stiffness increases linearly with the stack height. Our results show that noncovalent interactions may be used to control the shape and mechanical properties of artificial macromolecular aggregates offering a new route to solvent-induced control of two-dimensional supramolecular organization