C_atl_RADseq_de_novo_assembly

Species: Cedrus atlantica Manetti Number of individuals: one single adult individual coming from the Luberon forest(43°47' N / 5°12' E, France) Plant tissue: needles (diploid) Sequencing method: Restriction site Associated DNA sequencing, paired-end sequencing using the Illumina HiSeq2000 platform (Illumina Inc., San Diego, CA) (2 x 101 bp) Data description: 66,656 contigs generated by de novo assembly Assembly tool: Velvet 1.2.06 (Zerbino & Birney 2008

C_atl_mRNAseq_de_novo_assembly

Species: Cedrus atlantica Manetti Number of indiivudals: one single 2-year-old seedling that originated from the the Luberon forest (43°47' N / 5°12' E, France) and was grown in a greenhouse in a pot Plant tissues: needles and roots (diploid) Sequencing method: transcriptome sequencing, paired-end sequencing using the Illumina HiSeq2000 platform (Illumina Inc., San Diego, CA) (2 x 101 bp) Data description: 130,184 contigs generated by de novo assembly Assembly tool: CLC Genomics Workbench 4.8 (CLC bio, Cambridge, MA

SSR_genotypes

Eight nuclear SSRs genotyped in the 44 populations of the Aleppo pine

Environmental_Data

Bioclimatic variables, water availability and aridity indexes

Taxus Shoot Elongation

This file contains data for Taxus baccata phenology of shoot elongation from 2010 to 2012. The file also contains individual information about provenance (population), genet and sex

Pinus pinaster 6100 SNP data for 509 individuals

The excel file contains genotype data (6100 SNPs) for 509 Pinus pinaster trees, from 34 populations sampled along the species' natural distribution range

Genetic diversity statistics assayed per Portuguese P. nigra population and SSR locus.

Genetic diversity statistics assayed per Portuguese P. nigra population and SSR locus. Notes: na - observed number of alleles; ne - effective number of alleles (Kimura and Crow 1964); I - Shannon’s Information Index (Lewontin 1972); h – Nei’s gene diversity index (Nei 1973); Ho – observed heterozygosity; He – expected heterozygosity (Levene 1949); the F – fixation index; and s.d. – standard deviation.</p