29 research outputs found

    The genotype files of multiple birch species in Eurasia

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    Tsuda_Betula_sampleInfo: This file includes a list of population code, name, country, longitude (E) and latitude (N) which are corresponding to "Tsuda_Betula1594_7loc_STRUCTURE.txt". Tsuda_Betula_TetDip_FSTAT: The genotype data for software FSTAT. To analyze diploid-tetraploid combined data keeping allele frequencies, tetraploid genotypes were treated as two diploid individuals in FSTAT. Tsuda_Betula1594_7loc_STRUCTURE: The input file of STRUCTURE analysis based on 7loci of 1594 individuals. Missing data is coded as -9. Betula_Betula877_18loc: The input file of STRUCTURE analysis based on 18loci of 877 diploid individuals. Missing data is coded as -9. Tsuda_Betula_4spABC: The input fie of DIYABC based on 18 loci in 4 species

    DATA : Abies data

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    <p>BlastX and  functional annotation (sheet 1), SNPs design (sheet 2) and SNPs Genotyping* (sheet 3).</p> <p>*<em>Abies alba</em> and<em> A. cephalonica</em> populations (10 altitudinal gradients accross Europe from French Pyrennées to Greece) / 273 SNPs</p

    The genotype files of multiple birch species in Eurasia

    No full text
    Tsuda_Betula_sampleInfo: This file includes a list of population code, name, country, longitude (E) and latitude (N) which are corresponding to "Tsuda_Betula1594_7loc_STRUCTURE.txt". Tsuda_Betula_TetDip_FSTAT: The genotype data for software FSTAT. To analyze diploid-tetraploid combined data keeping allele frequencies, tetraploid genotypes were treated as two diploid individuals in FSTAT. Tsuda_Betula1594_7loc_STRUCTURE: The input file of STRUCTURE analysis based on 7loci of 1594 individuals. Missing data is coded as -9. Betula_Betula877_18loc: The input file of STRUCTURE analysis based on 18loci of 877 diploid individuals. Missing data is coded as -9. Tsuda_Betula_4spABC: The input fie of DIYABC based on 18 loci in 4 species

    AppendixS1

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    Blast results, GO annotations, GO annotation terms, associated microsatellites (including motif, primer and product size for each SSR) for each of the contigs and for both tax
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