5 research outputs found
Fast Evaluation of Two-Center Integrals over Gaussian Charge Distributions and Gaussian Orbitals with General Interaction Kernels
We present efficient algorithms for
computing two-center integrals
and integral derivatives, with general interaction kernels K(r12), over Gaussian charge
distributions of general angular momenta l. While
formulated in terms of traditional ab initio integration techniques,
full derivations and required secondary information, as well as a
reference implementation, are provided to make the content accessible
to other fields. Concretely, the presented algorithms are based on
an adaption of the McMurchie–Davidson Recurrence Relation (MDRR)
combined with analytical properties of the solid harmonic transformation;
this obviates all intermediate recurrences except the adapted MDRR
itself, and allows it to be applied to fully contracted auxiliary
kernel integrals. The technique is particularly well-suited for semiempirical
molecular orbital methods, where it can serve as a more general and
efficient replacement of Slater–Koster tables, and for first-principles
quantum chemistry methods employing density fitting. But the formalism’s
high efficiency and ability of handling general interaction kernels K(r12) and multipolar Gaussian
charge distributions may also be of interest for modeling electrostatic
interactions and short-range exchange and charge penetration effects
in classical force fields and model potentials. With the presented
technique, a 4894 × 4894 univ-JKFIT Coulomb matrix JAB = (A|1/r12|B) (183 MiB) can be computed in 50
ms on a Q2′2018 notebook CPU, without any screening or approximations
Fast Evaluation of Two-Center Integrals over Gaussian Charge Distributions and Gaussian Orbitals with General Interaction Kernels
We present efficient algorithms for
computing two-center integrals
and integral derivatives, with general interaction kernels K(r12), over Gaussian charge
distributions of general angular momenta l. While
formulated in terms of traditional ab initio integration techniques,
full derivations and required secondary information, as well as a
reference implementation, are provided to make the content accessible
to other fields. Concretely, the presented algorithms are based on
an adaption of the McMurchie–Davidson Recurrence Relation (MDRR)
combined with analytical properties of the solid harmonic transformation;
this obviates all intermediate recurrences except the adapted MDRR
itself, and allows it to be applied to fully contracted auxiliary
kernel integrals. The technique is particularly well-suited for semiempirical
molecular orbital methods, where it can serve as a more general and
efficient replacement of Slater–Koster tables, and for first-principles
quantum chemistry methods employing density fitting. But the formalism’s
high efficiency and ability of handling general interaction kernels K(r12) and multipolar Gaussian
charge distributions may also be of interest for modeling electrostatic
interactions and short-range exchange and charge penetration effects
in classical force fields and model potentials. With the presented
technique, a 4894 × 4894 univ-JKFIT Coulomb matrix JAB = (A|1/r12|B) (183 MiB) can be computed in 50
ms on a Q2′2018 notebook CPU, without any screening or approximations
Fast Evaluation of Two-Center Integrals over Gaussian Charge Distributions and Gaussian Orbitals with General Interaction Kernels
We present efficient algorithms for
computing two-center integrals
and integral derivatives, with general interaction kernels K(r12), over Gaussian charge
distributions of general angular momenta l. While
formulated in terms of traditional ab initio integration techniques,
full derivations and required secondary information, as well as a
reference implementation, are provided to make the content accessible
to other fields. Concretely, the presented algorithms are based on
an adaption of the McMurchie–Davidson Recurrence Relation (MDRR)
combined with analytical properties of the solid harmonic transformation;
this obviates all intermediate recurrences except the adapted MDRR
itself, and allows it to be applied to fully contracted auxiliary
kernel integrals. The technique is particularly well-suited for semiempirical
molecular orbital methods, where it can serve as a more general and
efficient replacement of Slater–Koster tables, and for first-principles
quantum chemistry methods employing density fitting. But the formalism’s
high efficiency and ability of handling general interaction kernels K(r12) and multipolar Gaussian
charge distributions may also be of interest for modeling electrostatic
interactions and short-range exchange and charge penetration effects
in classical force fields and model potentials. With the presented
technique, a 4894 × 4894 univ-JKFIT Coulomb matrix JAB = (A|1/r12|B) (183 MiB) can be computed in 50
ms on a Q2′2018 notebook CPU, without any screening or approximations
Scalable Electron Correlation Methods I.: PNO-LMP2 with Linear Scaling in the Molecular Size and Near-Inverse-Linear Scaling in the Number of Processors
We propose to construct
electron correlation methods that are scalable
in both molecule size and aggregated parallel computational power,
in the sense that the total elapsed time of a calculation becomes
nearly independent of the molecular size when the number of processors
grows linearly with the molecular size. This is shown to be possible
by exploiting a combination of local approximations and parallel algorithms.
The concept is demonstrated with a linear scaling pair natural orbital
local second-order Møller–Plesset perturbation theory
(PNO-LMP2) method. In this method, both the wave function manifold
and the integrals are transformed incrementally from projected atomic
orbitals (PAOs) first to orbital-specific virtuals (OSVs) and finally
to pair natural orbitals (PNOs), which allow for minimum domain sizes
and fine-grained accuracy control using very few parameters. A parallel
algorithm design is discussed, which is efficient for both small and
large molecules, and numbers of processors, although true inverse-linear
scaling with compute power is not yet reached in all cases. Initial
applications to reactions involving large molecules reveal surprisingly
large effects of dispersion energy contributions as well as large
intramolecular basis set superposition errors in canonical MP2 calculations.
In order to account for the dispersion effects, the usual selection
of PNOs on the basis of natural occupation numbers turns out to be
insufficient, and a new energy-based criterion is proposed. If explicitly
correlated (F12) terms are included, fast convergence to the MP2 complete
basis set (CBS) limit is achieved. For the studied reactions, the
PNO-LMP2-F12 results deviate from the canonical MP2/CBS and MP2-F12
values by <1 kJ mol<sup>–1</sup>, using triple-ζ (VTZ-F12)
basis sets
Characterization of the Fleeting Hydroxoiron(III) Complex of the Pentadentate TMC-py Ligand
Nonheme mononuclear hydroxoiron(III)
species are important intermediates in biological oxidations, but
well-characterized examples of synthetic complexes are scarce due
to their instability or tendency to form μ-oxodiiron(III) complexes,
which are the thermodynamic sink for such chemistry. Herein, we report
the successful stabilization and characterization of a mononuclear
hydroxoiron(III) complex, [Fe<sup>III</sup>(OH)(TMC-py)]<sup>2+</sup> (<b>3</b>; TMC-py = 1<i>-</i>(pyridyl-2′-methyl)-4,8,11-trimethyl-1,4,8,11-tetrazacyclotetradecane),
which is directly generated from the reaction of [Fe<sup>IV</sup>(O)(TMC-py)]<sup>2+</sup> (<b>2</b>) with 1,4-cyclohexadiene at −40 °C
by H-atom abstraction. Complex <b>3</b> exhibits a UV spectrum
with a λ<sub>max</sub> at 335 nm (ε ≈ 3500 M<sup>–1</sup> cm<sup>–1</sup>) and a molecular ion in its
electrospray ionization mass spectrum at <i>m</i>/<i>z</i> 555 with an isotope distribution pattern consistent with
its formulation. Electron paramagnetic resonance and Mössbauer
spectroscopy show <b>3</b> to be a high-spin Fe(III) center
that is formed in 85% yield. Extended X-ray absorption fine structure
analysis reveals an Fe–OH bond distance of 1.84 Å, which
is also found in [(TMC-py)Fe<sup>III</sup>–O–Cr<sup>III</sup>(OTf)<sub>3</sub>]<sup>+</sup> (<b>4</b>) obtained
from the reaction of <b>2</b> with Cr(OTf)<sub>2</sub>. The <i>S</i> = 5/2 spin ground state and the 1.84 Å Fe–OH
bond distance are supported computationally. Complex <b>3</b> reacts with 1-hydroxy-2,2,6,6-tetramethylpiperidine (TEMPOH) at
−40 °C with a second-order rate constant of 7.1 M<sup>–1</sup> s<sup>–1</sup> and an OH/OD kinetic isotope
effect value of 6. On the basis of density functional theory calculations,
the reaction between <b>3</b> and TEMPOH is classified as a
proton-coupled electron transfer as opposed to a hydrogen-atom transfer
