31 research outputs found
C. finmarchicus genome (contigs)
Contigs of C. finmarchicus genome assembled with Geneious 6.1.6. Sequencing technology: Ion Torrent, 200 bp. File contain consensus sequences in fastq file
Additional file 9: of Decadal stability in genetic variation and structure in the intertidal seaweed Fucus serratus (Heterokontophyta: Fucaceae)
Temporal versus local genetic differentiation. Temporal genetic change in comparison to local and regional genetic differentiation(F ST and D est ) for each population and sampling time point (historical and present). (XLSX 6 kb
Additional file 5 of Decadal stability in genetic variation and structure in the intertidal seaweed Fucus serratus (Heterokontophyta: Fucaceae)
Corrected microsatellite data. Microsatellite data corrected for allelic dropout in Structure format. The first row contains the names of all 31 markers. The following rows contain the individual genotype data. Each individual is represented in 2 consecutive rows. The first column contains the name of the individual, the second row contains the population number that individual belong to. The following 31 columns show the alleles of each marker as microsatellites base pair lengths. The population numbers (1â14) refer to the same sampling locations and times as in Additional file 4. (TXT 198 kb
Additional file 2: of Decadal stability in genetic variation and structure in the intertidal seaweed Fucus serratus (Heterokontophyta: Fucaceae)
Microsatellite markers. Characteristics of each microsatellite marker, including cycling conditions and multiplexing. (XLSX 8 kb
C. glacialis transcriptome (contigs)
Contigs of C. glacialis transcriptome assembled with Geneious 6.1.6. Sequencing technology: Ion Torrent, 200 bp. File contain consensus sequences in fastq file
Additional file 6: of Decadal stability in genetic variation and structure in the intertidal seaweed Fucus serratus (Heterokontophyta: Fucaceae)
Spatial differentiation. Regional and local genetic differentiation between sampling sites in historical and present samples estimated by F ST and D est with p values. (XLSX 10 kb
C. finmarchicus transcriptome (contigs)
Contigs of C. finmarchicus transcriptome assembled with Geneious 6.1.6. Sequencing technology: Ion Torrent, 200 bp. File contain consensus sequences in fastq file
Additional file 7: of Decadal stability in genetic variation and structure in the intertidal seaweed Fucus serratus (Heterokontophyta: Fucaceae)
Temporal changes. Estimates of effective population size (Ne), temporal genetic differentiation (F ST and D est ), and p values for temporal changes in diversity measures at each sampling site. (XLSX 6 kb
Additional file 8: of Decadal stability in genetic variation and structure in the intertidal seaweed Fucus serratus (Heterokontophyta: Fucaceae)
Diversity estimates. Diversity estimates, including heterozygosity (Hexp), allelic richness (Îą), and multi-locus heterozygosity (MLH), for each location and region with standard errors, and inbreeding coefficients F IS with p values for each population. (XLSX 8 kb
Additional file 3: of Decadal stability in genetic variation and structure in the intertidal seaweed Fucus serratus (Heterokontophyta: Fucaceae)
PCR cycling protocols. Time-release (a) and no-time-release (b) PCR cycling protocols. In the time-release protocol, the heat-activated DNA-polymerase was progressively released during the thermal cycling process. Annealing temperatures and number of cycles indicated with an X are specified for each marker in Additional file 2. (PDF 34 kb
