bgc input file for house sparrow parental population (reference population) when analysing Z-linked loci separately in parental sympatry

bgc input file for house sparrow parental population (reference population) when analysing Z-linked loci separately in parental sympatr

b.out_Z_parental sympatry

output from BGC: estimates of cline parameter beta for the 21 Z-linked loci analyzed separately in parental sympatr

File to link locus names with bgc output

File showing which loci refers to which 'bgc output number' for all 77 markers, only autosomal markers and only Z-linked marker

structure_input_file

'structure_input.txt': input file used when running structure. numbers in second column refer to: 1: house sparrows from Oslo, Norway 2: house sparrows from Hradec Králové, Czech Republic 3: house sparrows from sympatric population near Badajoz, Spain 4: Spanish sparrows from sympatric population near Badajoz, Spain 5: Spanish sparrows from the Gargano Peninsula 6: Spanish sparrows from Sardinia 7: F1-hybrids from aviar

b.out_hybrid-parents analysis

output from BGC: estimates of cline parameter beta for 77 the loci used in the hybrid-parents analysi

Genotypes for Spanish sparrow reference population

Genotypes for the individuals in the spanish sparrow reference population for the 77 SNP marker

hi.out_hybrid-parents analysis

output from BGC: estimates of hybrid index for the individuals in the hybrid-parents test populatio

File with the code used when running bgc

File with the code used when running bg

Genotypes for parental sympatry test population

Genotypes for the individuals in the admixed test population. 'BGC column' refers to the number given to indivudlas by the bgc output

bgc input file for parental sympatry test population when analysing autosomal loci separately

bgc input file for parental sympatry test population when analysing autosomal loci separatel