313 research outputs found
Dynamic Reaction Mechanisms of ClO¯ with CH<sub>3</sub>Cl: Comparison Between Direct Dynamics Trajectory Simulations and Experiment
We have investigated the dynamic
reaction mechanisms of *ClO¯
with CH3Cl (the asterisk is utilized to label a different
Cl atom). Ab initio molecular dynamics simulations at the MP2/6-31+G(d,p)
level of theory have been employed to compute the dynamic trajectories.
On the basis of our simulations, the dynamic reaction pathways for
the bimolecular nucleophilic substitution (SN2) reaction
channel and SN2-induced elimination reaction channel are
clearly illustrated. For the SN2 reaction channel, some
trajectories directly dissociate to the final products of CH3O*Cl and Cl¯, whereas the others involve the dynamic Cl¯···CH3O*Cl intermediate complex. As to the SN2-induced
elimination reaction channel, the trajectories lead to the final products
of CH2O, HCl, and *Cl¯ through the dynamic Cl¯···CH3O*Cl intermediate complex. More significantly, the product
branching ratios of Cl¯ and *Cl¯ predicted by our simulations
are basically consistent with previous experimental results (Villano
et al. J. Am. Chem. Soc. 2009, 131,
8227–8233)
Origin of the Microsolvation Effect on the Central Barriers of S<sub>N</sub>2 Reactions
We
have quantitatively analyzed the microsolvation effect on the
central barriers of microsolvated bimolecular nucleophilic substitution
(SN2) reactions by means of a two-step energy decomposition
procedure. According to the first energy decompositions, an obvious
increase in the central barrier for a microsolvated SN2
reaction against its unsolvated counterpart can be mainly ascribed
to the fact that the interaction between the solute and the conjunct
solvent becomes less attractive from the reactant complex to the transition
state. On the basis of the second energy decompositions with symmetry-adapted
perturbation theory, this less attractive interaction in the transition
state is primarily due to the interplay of the changes in the electrostatic,
exchange, and induction components. However, the contribution of the
change for the dispersion component is relatively small. A distinct
linear correlation has also been observed between the changes of the
total interaction energies and those of the corresponding electrostatic
components for the microsolvated SN2 reactions studied
in this work. Moreover, the two-step energy decomposition procedure
employed in this work is expected to be extensively applied to the
gas phase reactions mediated by molecules or clusters
Spin-Component-Scaled Double-Hybrid Density Functionals with Nonlocal van der Waals Correlations for Noncovalent Interactions
Nonlocal (NL) van der Waals correlation
has been incorporated into
the spin-component and spin-opposite scaled double-hybrid density
functionals (DHDFs) for noncovalent interactions. The short-range
attenuation parameters for the tested DHDFs with the NL correlations
are optimized by minimizing the mean absolute deviations (MADs) against
the S66 database. And consequently, the obtained DHDFs with the NL
correlations are denoted as PWPB95-NL, DSD-BLYP-NL, DSD-PBEP86-NL,
and DOD-PBEP86-NL. These four DHDFs with the NL correlations are further
assessed with the S22B, NCCE31, and ADIM6 databases. On the basis
of our benchmark computations, the cooperation of the NL correlation
and the spin-component and spin-opposite scaled DHDFs is successful
for noncovalent interactions. However, the performances of the four
aforementioned DHDFs with the NL correlations on the charge transfer
interactions are less than satisfactory
Double-Hybrid Density Functionals Free of Dispersion and Counterpoise Corrections for Non-Covalent Interactions
We have optimized two double-hybrid
density functionals (DHDFs)
within the frameworks of B2PLYP and mPW2-PLYP against the S22B database.
These two functionals are denoted as B2NC-PLYP and mPW2NC-PLYP, where
“NC” represents noncovalent interaction. The DHDFs of
B2NC-PLYP and mPW2NC-PLYP are optimized free of dispersion and counterpoise
corrections with triple-ζ quality basis sets. Combined with
the aug-cc-pVTZ basis set, these two functionals are further assessed
with the S66 database. According to our computations, both the B2NC-PLYP
and mPW2NC-PLYP functionals seem to be competent for investigating
noncovalent interactions. Note that the triple-ζ quality basis
sets with adequate polarization and diffuse functions should be employed
for practical applications. However, different exchange and correlation
functionals may be selected and/or modified to reduce the amount of
the Fock-exchange in the future
Efficient Production of Valuable Aromatic <i>N</i>‑Heterocycles from Bio-Polyols by Heterogeneous Catalysis via Controlling Unstable Intermediate Conversion
Efficient
and controllable conversion of renewable polyols to valuable N-containing products by heterogeneous catalysis, especially
under relativley mild conditions (<200 °C), remains a significant
challenge. Here, we develop a method for one-step efficient production
of 2-methylquinoxalines (2-MQs), a type of high-value aromatic N-heterocycles, directly from polyols in the presence of
supported Pt dehydrogenation catalyst through controllably in situ
trapping reactive pyruvaldehyde (PA) intermediate by aryl-1,2-diamine
at the temperature of only 140 °C. The presence of aryl-1,2-diamine
not only enabled the formation of 2-MQs, but also markedly enhanced
the polyols’ carbon utilization to near-quantitative (>98
C%)
level. More importantly, organic solvent-enabled kinetics control
of competitive reactions associated with PA transformation, i.e.,
the condensation with aryl-1,2-diamine to produce 2-MQs and the Cannizzaro
reaction to form lactic acid, allowed to access the desired 2-MQs
in a controllable manner with yields ranging from 12 C% to 81 C%.
The application of this approach to attain diverse 2-MQs and analogues
of interest in pharmaceutical industry has been demonstrated
Noncovalent Interactions in Hydrated Nitrosonium Ion Clusters Mediated by Hydrogen-Bonded Water Networks
As
important species in the D region of the ionosphere,
hydrated nitrosonium ion clusters [NO+(H2O)n] are also archetypal and concise models
to illustrate effects of different solvent shells. We have investigated
noncovalent interactions in NO+(H2O)3 and NO+(H2O)4 isomers with high
levels of ab initio and symmetry-adapted perturbation theory (SAPT)
methods. On the basis of our computations, the exchange energies become
much more repulsive, whereas the induction energies are significantly
more attractive for the noncovalent interactions of NO+ with hydrogen-bonded water chains. Combined with analyses of the
electron densities for the NO+(H2O)3 and NO+(H2O)4 isomers, we propose
that the counteracting effect of the exchange and induction energies
could be deemed as an index for the tendency to form the HO–NO
covalent bond. Moreover, we have also found that the third-order induction
terms are very important to evaluate reasonable charge transfer energies
with the SAPT computations
Structural Preferences Shape the Entropic Force of Disordered Protein Ensembles
Intrinsically disordered
protein regions (IDRs) make up over 30%
of the human proteome and exist in a dynamic conformational ensemble
instead of a native, well-folded structure. Tethering IDRs to a surface
(for example, the surface of a well-folded region of the same protein)
can reduce the number of accessible conformations in these ensembles.
This reduces the ensemble’s conformational entropy, generating
an effective entropic force that pulls away from the point of tethering.
Recent experimental work has shown that this entropic force causes
measurable, physiologically relevant changes to protein function.
But how the magnitude of this force depends on IDR sequence remains
unexplored. Here, we use all-atom simulations to analyze how structural
preferences in IDR ensembles contribute to the entropic force they
exert upon tethering. We show that sequence-encoded structural preferences
play an important role in determining the magnitude of this force:
compact, spherical ensembles generate an entropic force that can be
several times higher than more extended ensembles. We further show
that changes in the surrounding solution’s chemistry can modulate
the IDR entropic force strength. We propose that the entropic force
is a sequence-dependent, environmentally tunable property of terminal
IDR sequences
Structural Preferences Shape the Entropic Force of Disordered Protein Ensembles
Intrinsically disordered
protein regions (IDRs) make up over 30%
of the human proteome and exist in a dynamic conformational ensemble
instead of a native, well-folded structure. Tethering IDRs to a surface
(for example, the surface of a well-folded region of the same protein)
can reduce the number of accessible conformations in these ensembles.
This reduces the ensemble’s conformational entropy, generating
an effective entropic force that pulls away from the point of tethering.
Recent experimental work has shown that this entropic force causes
measurable, physiologically relevant changes to protein function.
But how the magnitude of this force depends on IDR sequence remains
unexplored. Here, we use all-atom simulations to analyze how structural
preferences in IDR ensembles contribute to the entropic force they
exert upon tethering. We show that sequence-encoded structural preferences
play an important role in determining the magnitude of this force:
compact, spherical ensembles generate an entropic force that can be
several times higher than more extended ensembles. We further show
that changes in the surrounding solution’s chemistry can modulate
the IDR entropic force strength. We propose that the entropic force
is a sequence-dependent, environmentally tunable property of terminal
IDR sequences
Data_Sheet_1_Nexus Between Consumer’s Motivations and Online Purchase Intentions of Fashion Products: A Perspective of Social Media Marketing.docx
This study aimed to investigate the effects of customers’ motivations (specifically young consumers) on online purchase intentions as mediated by commitment toward online fashion retailers. The survey method was used to collect data from Chinese respondents using a questionnaire. The convenience sampling technique was used to collect data from 275 respondents. Collected data were analyzed on smart-PLS using the structural equation modeling technique. Results of the study show a significant and positive impact of social empowerment and remuneration motivations on consumer commitment online purchase intention. Further results show that consumer commitment partially mediates the relationship between social empowerment, remuneration, and online purchase intention. This study contributes to the literature in the domain of consumer commitment by focusing on the underlying needs and motivations of consumers. The researchers have demonstrated a strong need to understand the dynamics of commitment due to its importance in affecting purchase intention. This study also has several implications that guide online retailers how to motivate consumers with social, remuneration and empowerment incentives to develop their intention to purchase online. Fashion retailers are suggested to gratify certain consumer motives to increase commitment. Specifically, among the three motives, empowerment motivation emerged as the strongest predictor of consumer commitment in social media environment. This study will help to the online brands to attract more customers by providing the motivation such financial, empowerment and socialization.</p
326 differently abundant proteins
The dataset included urinary proteins that were differently abundant between adult donkeys and donkey foals. </div
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