AppendixS1

Blast results, GO annotations, GO annotation terms, associated microsatellites (including motif, primer and product size for each SSR) for each of the contigs and for both tax

Echinogammarus veneris, transcriptome shotgun assembly

Echinogammarus veneris, transcriptome shotgun assembl

FASTAQ file for Echinogammarus veneris

FASTAQ file for Echinogammarus veneri

IBE_vs_IBD_tests

R scripts to perform the Mantel tests for detecting isolation-by-distance and isolation by-environment patterns using the ecodist packag

SNP_data

Raw SNP data called from transcriptome accession no.: JV134525–JV157085 TSA NCBI, and inferred SNP data using the software PHAS

STRUCTURE

Shell scripts and results of the STRUCTURE analysis with K=1 to

KASP_details

Sequences (raw data) on which primer design for KASP assay was based and SNPs therei

environmental_data

A list of environmental variables characterizing the four studied sites from southern France (Ventoux, Lure, Issole and Vésubie

sampling_sites

Lambert 3 coordinates and altitude of all sampled individual

common_garden_data_and_Qst-Fst_tests

A series of files containing common garden data (budburst, survival and growth) from a nursery tests (see Sagnard et al. 2002) and R scripts to perform the Qst-Fst tests with the QstFstComp packag