Additional file 2: of Pinpointing the vesper bat transposon revolution using the Miniopterus natalensis genome

Novel Miniopterus natalensis transpsoable elements were identified using de novo methods and manual curation. Sequences are in FastA format. (FAS 39 kb

Additional file 4: Table S4. of Genome sequence of Phormia regina Meigen (Diptera: Calliphoridae): implications for medical, veterinary and forensic research

A list showing the distribution of glutathione S-transferases in the male and female P. regina genomes. (XLSX 9 kb

Additional file 2: of Whole mitochondrial genomes provide increased resolution and indicate paraphyly in deer mice

Whole mitochondrial exomes. Description: Alignment of the protein coding genes of each assembled mitogenome along with Akodon montensis, downloaded from GenBank. (TXT 257 kb

Additional file 4: Table S2. of Whole mitochondrial genomes provide increased resolution and indicate paraphyly in deer mice

v2. Cytochrome b blast validation. Best hits to GenBank entries for cytochrome b genes from assembled mitochondrial genomes. For N. mexicana, the best hit was to a closely related species, with the second best hit to N. mexicana. (XLS 38 kb

Additional file 1: Table S1. of Genome sequence of Phormia regina Meigen (Diptera: Calliphoridae): implications for medical, veterinary and forensic research

tBLASTx results of contigs with D. melanogaster’s homologus gene sequences of gustatory receptors, odorant binding proteins, odorant receptors and ionotropic receptors. (XLSX 22 kb

Additional file 14: Table S11. of Genome sequence of Phormia regina Meigen (Diptera: Calliphoridae): implications for medical, veterinary and forensic research

Top hits of sex determining genes homologous to D. melanogaster in the male and female P. regina assembled genomes. (DOC 34 kb

Additional file 2: of Whole mitochondrial genomes provide increased resolution and indicate paraphyly in deer mice

Whole mitochondrial exomes. Description: Alignment of the protein coding genes of each assembled mitogenome along with Akodon montensis, downloaded from GenBank. (TXT 257 kb

Additional file 8: Figure S2. of Genome sequence of Phormia regina Meigen (Diptera: Calliphoridae): implications for medical, veterinary and forensic research

Top-hit species distribution from Blast2GO for the male and female P. regina. The top hit species is the blow fly L. cuprina. The species listed are those with >25 hits. Those with less than the threshold are summed and grouped in the ‘Other’ category. (JPG 551 kb

Additional file 3: Figure S1. of Whole mitochondrial genomes provide increased resolution and indicate paraphyly in deer mice

Cytochrome b phylogenetic validation. ML tree of the assembled cytochrome b sequences compared with cytochrome b sequences downloaded from GenBank. These results showed if the sequences from our data correlated with known cytb sequences. (PNG 60 kb

Additional file 6: Figure S1. of Genome sequence of Phormia regina Meigen (Diptera: Calliphoridae): implications for medical, veterinary and forensic research

The mitochondrial DNA (mtDNA) genome of Phormia regina, annotated using the mtDNA genome of Cochliomyia hominivorax mtDNA genome. The AT-rich region is colored in purple, tRNA and rRNA genes in red, and protein coding genes are in yellow. (JPG 102 kb