Phenotype measurements for all 22 traits and all individuals from four Populus hybrid zones

Columns: individual number; source population (Italy, Austria, Hungary, Spain); individual ID; species assignment (H, hybrid; A, P. alba; T, P. tremula); followed by phenotypes for all 22 phenotypic traits measured/calculated. Phenotype measurements represent averages over 5 leaves measured per tree

Result of Structure run for Italy, using linkage model (Input file for R code; text file)

Columns: individual number; individual ID; percent missing data; proportion of ancestry from cluster 1 (P. tremula); proportion of ancestry from cluster 2 (P. alba); followed by their 90% probability intervals

Phenotype measurements for Italy, admixed individuals only, 8 mapping traits (Input file for R code)

Rows give measurements for individuals in the same order as in Structure files; columns give 8 main phenotypic traits used for admixture mapping. Phenotype measurements represent averages over 5 leaves measured per tree

Information on microsatellite markers used (Input file for R code)

Columns: locus number; abbreviated locus name used in this study; locus name published; chromosome; position on chromosome in bp; position in bp/200,000 as proxy for cM; marker type (dominant or co-dominant)

Population map files for STACKS

Very simple text file needed to run 'populations' command of STACK

GBS fastq files (1/2)

Raw GBS compressed fastq files (n=10), to process with STACK

Datafile_52SSRs_137inds

Genotype of 137 individuals with 52 nuclear SSR

Scripts compressed

Includes ones bash script to run STACKS and trimmomatic and six R scripts to process the info from STACKS and calculate age of the genet

Barcodes files for STACKS

Very simple text files needed to run 'process_radtags' command of STACK

Datafile_21SSRs_533ramets

Genotype of 533 ramets with 21 nuclear SSR